MouseLand/cellpose

Issues

• [BUG]NET ERROR: tensors used as indices must be long, byte or bool tensors

  #1079 opened 9 days ago
  2

• [BUG] 'DenoiseModel' object has no attribute 'train'

  #1078 opened 10 days ago
  0

• [BUG] possibly issues with anisotropy in cellpose/gui/make_train.py

  #1076 opened 19 days ago
  3

• [FEATURE] Intel ARC GPU Support (pytorch-2.5)

  #1075 opened 21 days ago
  0

• [BUG] Cellpose fails when torch version has more than two points

  #1074 opened 22 days ago
  0

• Python based (no gui) way of estimating diameters

  #1073 opened 22 days ago
  0

• [BUG] error when --diameter is set to 0.

  #1072 opened 25 days ago
  0

• [BUG] Custom model not able to detect ROIs after training on cyto3,

  #1071 opened 25 days ago
  1

• Nucleoplasmic partitioning of individual cells

  #1070 opened a month ago
  0

• [BUG] Weird 3D artifact when segmenting cells

  #1069 opened a month ago
  0

• how to get vector flow representation?

  #1068 opened a month ago
  0

• Is there a way to force install Cellpose 2? If version is not specified, it installs Cellpose 3.

  #1067 opened a month ago
  1

• Nuclear Mask Dilation: follow up to issue #1009

  #1066 opened a month ago
  1

• [FEATURE] Install the API only

  #1065 opened a month ago
  0

• [BUG]Value Error when training Cellpose3

  #1064 opened a month ago
  0

• Issues with Cellpose on macOS using the MPS Backend

  #1063 opened a month ago
  2

• [FEATURE] Larger than memory images: performant and scalable distributed implementation for workstations and clusters

  #1061 opened a month ago
  0

• [BUG] Drawing masks does not work properly at high ROI counts?

  #1060 opened a month ago
  0

• Issue with io.masks_flows_to_seg in notebook example

  #1059 opened a month ago
  0

• two-photon images segmentation

  #1057 opened a month ago
  0

• [BUG] H&E image nucleus segmentation works with v2 but not with v3

  #1056 opened a month ago
  4

• [BUG] Issue when running with post-release version of PyTorch

  #1054 opened a month ago
  0

• Cellpose3 running with Vizgen Post-processing Tool (VPT)

  #1053 opened a month ago
  0

• CRITICAL:cellpose.io:ERROR: could not read masks from file, can only convert an array of size 1 to a Python scalar

  #1052 opened a month ago
  0

• Still having drawing bug where masks wont actually be created once drawn

  #1051 opened a month ago
  8

• [FEATURE] calibrate diameter with command line

  #1050 opened 2 months ago
  0

• Cell pose graph from plot.show_segmentation

  #1048 opened 2 months ago
  0

• Apply image restoration sequentially before segmentation

  #1047 opened 2 months ago
  4

• RuntimeError: nonzero is not supported for tensors with more than INT_MAX elements

  #1046 opened 2 months ago
  2