Pinned Repositories
bugv
python genome visualization package
circlncRNAnet
An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs
flair
Full-Length Alternative Isoform analysis of RNA
GiottoVisuals
idep
Integrated Differential Expression and Pathway analysis
lapa
Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.
LncPipe_likelet
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nanocompore
RNA modifications detection from Nanopore dRNA-Seq data
nanotail
R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions
MustafaElshani's Repositories
MustafaElshani/bugv
python genome visualization package
MustafaElshani/circlncRNAnet
An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs
MustafaElshani/flair
Full-Length Alternative Isoform analysis of RNA
MustafaElshani/GiottoVisuals
MustafaElshani/idep
Integrated Differential Expression and Pathway analysis
MustafaElshani/lapa
Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.
MustafaElshani/LncPipe_likelet
MustafaElshani/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
MustafaElshani/nanocompore
RNA modifications detection from Nanopore dRNA-Seq data
MustafaElshani/nanotail
R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions
MustafaElshani/QuPath_Podocyte
Scripts for running podocyte segmentation and IF quantification in QuPath
MustafaElshani/tailfindr
An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.
MustafaElshani/seurat
R toolkit for single cell genomics
MustafaElshani/TumoroidSpatialLongRead
MustafaElshani/Visium_ONT_analysis