/CONTINUITY

Primary LanguagePython

CONTINUITY: CONnectivity Tool with INtegration of sUbcortical regions, registration and visualIzation of TractographY

Install

  1. Install miniconda or conda.
  2. Clone the repository, install environtment and activate environment
git clone https://github.com/NIRALUser/CONTINUITY.git
cd CONTINUITY
conda env create -f CONTINUITY_env.yml
conda activate CONTINUITY_env
  1. Run CONTINUITY
python3 main_CONTINUITY.py

Quality control - Connectome visualization

image

For the next time, to run CONTINUITY, you just need to activate your environment: conda activate CONTINUITY_env