The folder contains the python and jupyter notebook file containing all functions and libraries used to compute the persistent barcodes,
persistent lifetimes, Betti-curves etc on the density data.
The density file must inlcude the dimensions and the grids for proper execution.
For example, a 2-d image with 100*100 bins should include
2
100
100
in the begining of the density file.
The files are executable with proper libraries
Requirements:
numpy1.23.3
gudhi3.5.0
matplotlib3.3.1
Please cite the paper : https://chemrxiv.org/engage/chemrxiv/article-details/63c5f05a07308a57c49afe05