/Global-sequence-alignment-in-JS

This implementation makes a global alignment between two strings and it demonstrates the use of the global alignment algorithm.

Primary LanguageHTMLMIT LicenseMIT

Global sequence alignment in JS

This JavaScript/HTML5 implementation makes a global sequence alignment between two strings, namely between a sequence s0='TGAATTCAGTTA' and s1='TGGATCGA'. In fact, this simple implementation makes an alignment between any two strings. All symbols from UTF-8 are accepted by this algorithm. For an implementation of local sequence alignment please see this repository.

Live demo

https://gagniuc.github.io/Global-sequence-alignment-in-JS/

Screenshot

screenshot

References

  • Paul A. Gagniuc. Algorithms in Bioinformatics: Theory and Implementation. John Wiley & Sons, Hoboken, NJ, USA, 2021, ISBN: 9781119697961.