Naibin

Pinned Repositories

admixturePipeline
A pipeline that accepts a VCF file to run through Admixture
Language:Python00
bwa
aln and snp
00
d3-hierarchy
2D layout algorithms for visualizing hierarchical data.
Language:JavaScript00
lulc_area_time_series
Language:JavaScript00
Mabs
Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
Language:C00
MCScanX
MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
Language:CAP CDS00
MingPCACluster
A new simple and efficient software to PCA and Cluster For popolation VCF File or STOmics gem File
Language:C++00
naibin.github.io
seqfun.com
Language:HTML00
neo4j_genome_ko
Language:Python00
NGS_Pipeline_Utilities
A python toolkit to facilitate development, regression testing and deployment of NGS pipelines
Language:Python00

Naibin's Repositories

Naibin/admixturePipeline
A pipeline that accepts a VCF file to run through Admixture
Language:Python00
Naibin/bwa
aln and snp
00
Naibin/d3-hierarchy
2D layout algorithms for visualizing hierarchical data.
Language:JavaScript00
Naibin/lulc_area_time_series
Language:JavaScript00
Naibin/Mabs
Mabs, a genome assembly tool which optimizes parameters of Hifiasm and Flye
Language:C00
Naibin/MCScanX
MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
Language:CAP CDS00
Naibin/MingPCACluster
A new simple and efficient software to PCA and Cluster For popolation VCF File or STOmics gem File
Language:C++00
Naibin/naibin.github.io
seqfun.com
Language:HTML00
Naibin/neo4j_genome_ko
Language:Python00
Naibin/NGS_Pipeline_Utilities
A python toolkit to facilitate development, regression testing and deployment of NGS pipelines
Language:Python00
Naibin/Pandas-for-Population-Structure-Barplots
A jupyter notebook tutorial for making high-quality barplot figures from population structure analyses (Admixture, Structure) with Python & Pandas.
Naibin/pggb
the pangenome graph builder
Naibin/PHG
Practical Haplotype Graph
Naibin/Population_Q_plot
Naibin/psvcp_v1.01
Pan-genome Construction and Population Structure Variation Calling pipeline
Naibin/QTL-Snakemake-Workflow
vcf homo filter
Naibin/Reseqtools
A Toolkit for analyzing next-generation DNA Re-Sequencing data
Naibin/scripts
bioinformatic scripts
Naibin/tripal
The Tripal package is a suite of Drupal modules for creating biological (genomic, genetic, breeding) websites. Visit the Tripal homepage at http://tripal.info for documentation, support, and other information. The Drupal project page is at http://drupal.org/project/tripal.