Pinned Repositories
compose_setup
Demonstrate how to setup and run Dockstore using composed containers
dockstore
An app store for scientific workflows, tools, notebooks, and services
dockstore-documentation
The documentation for Dockstore.org
dockstore-ui2
Website user interface for Dockstore in Angular2
bcc2020-training
Training materials for our BCC 2020 training workshop. Test
CircRNA-Mapping
dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore testing
dockstore-tool-md5sum
A very simple tool that just performs an md5sum
dockstore-training
Working space for creating dockstore training materials
dockstore-whalesay-imports
Whalesay dockstore files, tests for workflows with imports
NatalieEO's Repositories
NatalieEO/bcc2020-training
Training materials for our BCC 2020 training workshop. Test
NatalieEO/CircRNA-Mapping
NatalieEO/dockstore-tool-bamstats
A repo for the BAMStats command, used as the tutorial for Dockstore testing
NatalieEO/dockstore-tool-md5sum
A very simple tool that just performs an md5sum
NatalieEO/dockstore-training
Working space for creating dockstore training materials
NatalieEO/dockstore-whalesay-imports
Whalesay dockstore files, tests for workflows with imports
NatalieEO/dockstore-whalesay-wdl-only
Sample dockstore whalesay repo for testing
NatalieEO/eager
A fully reproducible and state-of-the-art ancient DNA analysis pipeline
NatalieEO/exoseq
Please consider using/contributing to https://github.com/nf-core/sarek
NatalieEO/galaxy-workflow-dockstore-example-2
NatalieEO/gatk
Official code repository for GATK versions 4 and up
NatalieEO/gatk4-somatic-cnvs
Workflows for somatic copy number variant discovery with GATK4
NatalieEO/ghapps-single-workflow
description
NatalieEO/ghAppsMultipleWorkflows
NatalieEO/homebrew-tap
NatalieEO/mirna-seq-pipeline
NatalieEO/multi-step-cwl
A CWL workflow to test new and more advanced features of the language
NatalieEO/one-workflow-many-ways
Implementing bamqc over and over again
NatalieEO/public_health_viral_genomics
NatalieEO/refget-compliance-suite
Repository for the Google Summer of Code for the Reference Retrieval API
NatalieEO/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
NatalieEO/Seqware-BWA-Workflow
This is the BWA workflow used in the PanCancer project used to allign all the BAM files.
NatalieEO/silly-workflow-language-interface
Example implementation of support for a hypothetical language (SWL)
NatalieEO/simulate_phenotypes
Code for simulating phenotypes
NatalieEO/SIR-Newman-Graph-Experiments
NatalieEO/training-material
A collection of Galaxy-related training material
NatalieEO/workflow-dockstore-yml
A repo that includes .dockstore.yml
NatalieEO/xenahub
Stand-alone Dockerized Xena Hub
NatalieEO/test-dockstore-ui2
testing
NatalieEO/test-workflows-and-tools
description