National-COVID-Cohort-Collaborative/Phenotype_Data_Acquisition
The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream
Python
Issues
- 0
additional info on install_github call
#238 opened by MPagel - 0
zipr may produce corrupt zip file
#237 opened by MPagel - 0
- 1
Bug in createCohort for Redshift
#232 opened by MPagel - 2
User Permissions
#231 opened by Bino333 - 0
DEVICE_EXPOSURE missing from the USER NOTES
#229 opened by aandresalvarez - 4
R Exporter failing during Observation table write
#228 opened by nzurawski - 1
Will the Python exporter have a PCORNET Postgres adapter in the near future?
#227 opened by lav-patel - 11
O2 codes vs concept_ids
#226 opened by MelaniePhilofsky - 2
Python Exporter creates double quotes in output file
#212 opened by ns5001 - 0
Ventilator Data Availability
#225 opened by UzmaHasan - 4
Unable to load N3CHDSI library: unable to load shared object library
#223 opened by riqi-rob-mcconeghy - 2
control_map null values
#221 opened by chrisroederucdenver - 1
- 0
Pull request submitted: Incorrect SQL syntax for BigQuery: TO_DATE() --> DATE()
#218 opened by mgkahn - 0
ACT MSSQL Phenotype 4 missing placeholder on patient_dimension for @cdmDatabaseSchema
#215 opened by DarrenWHenderson - 2
- 4
Add new LOINC codes on phenotype-33 branch
#206 opened by empfff - 4
Potential missing COVID measurements
#177 opened by mgkahn - 5
- 0
- 0
One more DRUG_EXPOSURE ALL-CAPS in BigQuery
#204 opened by mgkahn - 1
BigQuery OMOP: device exposure code uses ALL-CAPS
#203 opened by mgkahn - 0
Add DEVICE_EXP
#200 opened by empfff - 0
NLP process diagram
#201 opened by ymnliu - 1
Non standard OMOP concepts in phenotype
#199 opened by skhokhar - 0
Lab measurements date/time
#198 opened by JohannaLoomba - 0
Extract SQL Postgres fix
#194 opened by kepishelf - 0
Weak dx date issue, OMOP scripts
#193 opened by empfff - 4
datepart() not valid in bigquery
#186 opened by mgkahn - 2
Postgresql Phenotype Extract SQL issue
#192 opened by kepishelf - 3
- 1
- 2
Oracle OMOP Phenotype script v3.1 error
#187 opened by kirenotneb - 4
- 1
Add two new ICD-10-CM codes to the phenotype (3.1)
#175 opened by empfff - 6
Consolidating Phenotype 3.1 Changes
#181 opened by empfff - 2
We're using up the buddies
#162 opened by empfff - 3
OMOP birthdates
#176 opened by empfff - 1
COVID Test only patients
#178 opened by mgkahn - 0
ACT Oracle ignores weak positives
#179 opened by dvdrndlph - 1
Oracle OMOP phenotype SQL missing comma
#174 opened by kirenotneb - 0
PCORnet CDM 6.0 Extract Code Changes
#171 opened by KellieMarie - 1
- 1
bigquery/OMOP: sex/hispanic/race data type confusion
#170 opened by mgkahn - 1
PhenotypeScripts: OMOP SQL bug?
#172 opened by mgkahn - 1
SqlRender issue with DATEDIFF Function
#159 opened by kmkostka - 2
- 1
ACT/Oracle Phenotype 3.0 - Typo in select syntax
#161 opened by bjbush - 0
Phenotype 3.0 Tasks
#158 opened by empfff