/Team-Doudna

“Just because we are not ready for scientific progress does not mean it won’t happen.” - Jennifer A. Doudna

Primary LanguagePython

Team Doudna 😎

Be like stem cells, differentiate yourself from other

About the Internship

HackBio is a virtually regimented research internship that is practice oriented and focused on equipping scientists with advanced bioinformatics and computational biology skills, by the end of the internship, successful interns should have:

  • Honed their skills in a specific bioinformatics method
  • Have at least a peer-reviewed article to show for the internship experience.

Team information

Task Status👇

  • 9 persons completed
  • 1. Isha Team leader - Python
  • 2. Premnath - Python
  • 3. Lakshini - R
  • 4. Morali - Python
  • 5. Adedoyin - Python
  • 6. Shalini - C++
  • 7. Akanksha - C++
  • 8. Kartik - R
  • 9. Shabnam - Ruby
  • 10. Anjali - Python
  • 11. Vivian - Perl
  • 12. Jovel - Python
  • 13. Devika- JAVA
  • 14. Fatima - Python
  • 15. Xiao- JAVA
  • 16. Azeszat- JAVA
  • 17. Fadekemi - R
  • 18. Adedamola - R
  • 19. Neemah - R

(Will be updated soon once we get full info about team members)

Objective (For team members)

Stage 0️⃣

  • Update your slack workspace tag to [0] and put in your biostack
  • Go to your profile and update your status. Also under "Edit profile" in "What I do" row put your biostack
  • note there are 8 biostacks that define your area of specialization:
    • genomics
    • Drug development
    • vaccine informatics
    • medicinal chemistry
    • cheminformatics
    • data analytics
    • software development
    • science communication
  • Individuals should write a script (using any language) that prints your name, your email, your slack username (with @) and your biostack
  • Note that we have to have at least 7 different languages. IMPORTANT: Inform the version of the program. Follow below to find yours:
    • Python
    • Javascript
    • Ruby
    • PHP
    • Go
    • R
    • C++
    • Any other that you know (please inform us on our channel)
  • Create your own repository on Github. You will use it to first upload your script to Github *Push the script to our team’s github repository
    • Fork the team's repo on the top right of your screen on github
    • commit the file and create a pull request to the master
  • Collaboratively as a team, include a bash script that clones the git repo, and generates a CSV file from all the outputs of your team’s scripts
  • Submit your team’s github link to ​only​ the bash script
Output Template (Your script output should be something like this)
NAME: *Your full name*
E-MAIL: *Your e-mail* 
SLACK USERNAME: @+*username*
BIOSTACK: *Name of biostack you chose. The only first letter is capital*

After you get the desired output, please name your file yourname_stage_0_script.py/R/sh etc; An example: Premnath_stage0_script.py

Workflow

alt text

If you guys have any doubts, drop your queries in our group channel!😁