/EC601_CSNA_fracture_detection

Class project for detection of Spinal Fractures in CT Data

Primary LanguagePython

EC601_CSNA_fracture_detection

Class project for detection of Spinal Fractures in CT Data

Conda Environment Setup

To setup a conda environment with required dependencies, first install your favorite flavor of anaconda.

Configure environment.

Choose the environment-XX.yml file that best matches your system configuration.

  • For computers with a CUDA capable GPU, this is environment-CUDA.yml
  • For any Windows PC running windows 10 or later, this is environment-WIN.yml
  • For anything not listed above (mac included), use environment-CPU.yml

then run the configuration to create a conda env:

conda env create -f YOUR_CONFIG.yml

The environment will be created according to the configuration chosen, and can then be activated with:

conda activate csna

Net selection

We are tring to use UNet model to complete our project.

After using UNet_model.py we have to setup our enivironment first. They can be activated with:

pip install -r requirements.txt