Pinned Repositories
bracer
BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
cell2location
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
cwltool
Common Workflow Language reference implementation
cyvcf2
cython + htslib == fast VCF and BCF processing
drake
Data workflow tool, like a "Make for data"
IGoR
IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data.
jobson
A platform for transforming command-line applications into a job service.
knime-base
opentargets
NickEngland's Repositories
NickEngland/bracer
BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data
NickEngland/cell2location
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
NickEngland/cwltool
Common Workflow Language reference implementation
NickEngland/cyvcf2
cython + htslib == fast VCF and BCF processing
NickEngland/drake
Data workflow tool, like a "Make for data"
NickEngland/IGoR
IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data.
NickEngland/jobson
A platform for transforming command-line applications into a job service.
NickEngland/knime-base
NickEngland/opentargets
NickEngland/openVirus
aggregation of scholarly publications and extracted knowledge on viruses and epidemics.
NickEngland/phenocycler-pipeline
PhenoCycler segmentation pipeline
NickEngland/python_testing