NicolaDM/MAPLE

Issues

• output in nexus file

  #24 opened 8 months ago by MarliesJFrancine
  4

• Implementing RF calculation

  #23 opened 8 months ago by MarliesJFrancine
  1

• Q: internal ancestral reconstruction, e.g. number of mutations

  #22 opened 9 months ago by sanerum
  3

• Still running after 7 hours

  #6 opened a year ago by tseemann
  2

• Bacteria

  #9 opened a year ago by derekcg
  6

• do NOT resolve polytomies.

  #21 opened a year ago by leke-lyu
  5

• The tree output by maple has too many branch lengths of zero

  #19 opened a year ago by fightyy
  4

• How to root the tree?

  #20 opened a year ago by leke-lyu
  3

• How to get nucleotide equilibrium and symmetry matrix

  #18 opened a year ago by fightyy
  2

• Taking longer than expected

  #17 opened a year ago by Wytamma
  2

• Maple tree output shows false in the middle of the newick format

  #11 opened 2 years ago by josenikhid97
  1

• Extension for Maple file format: include reference

  #7 opened 2 years ago by corneliusroemer
  2

• Does Maple print log-likelihood values ?

  #12 opened 2 years ago by josenikhid97
  4

• ZeroDivisionError: float division by zero

  #15 opened 2 years ago by Bin-Ma
  2

• what the diff with usher?

  #13 opened 2 years ago by liamxg
  6

• what is the diff betwee maple and fastree?

  #14 opened 2 years ago by liamxg
  2

• Mapple runnning on Model JC throws an error

  #10 opened 2 years ago by josenikhid97
  2

• Extension for Maple format: including insertions

  #8 opened 3 years ago by corneliusroemer
  1

• More compact diff file?

  #5 opened 3 years ago by tseemann
  2

• Check --reference exists before opening

  #1 opened 3 years ago by tseemann
  1

• Potential for multi-threading?

  #2 opened 3 years ago by tseemann
  1

• More compact diff file?

  #4 opened 3 years ago by tseemann
  0

• More compact diff file?

  #3 opened 3 years ago by tseemann
  0