A suite of knockoffs functions and methods from existing R-packages and papers. Some of the R functions are simple wrapper functions, while others are novel implementations of recent methods.
To invoke the R-package in development mode: please clone the repository, set it as working directory of your R session, and run
devtools::load_all().
In the vignette folder we provide various example use cases of the knockofftools.
Knockoff tools is introduced in Zimmermann et al. 2024).
Furthermore, details of the novel implemented methods can be found in the following papers:
- Sparse sequential knockoffs in Zimmermann et al. (2024)
- Sequential knockoffs in Kormaksson et al. (2021)
- Predictive knockoffs in Sechidis et al. (2021)
If you make use of any of these, please cite the papers above.
- Matthias Kormaksson, matthias-1.kormaksson_ext@novartis.com
- Konstantinos (Kostas) Sechidis, kostas.sechidis@novartis.com
- Manuela Zimmermann, manuela.zimmermann@novartis.com