Pinned Repositories
bamzinga
Counts the number of reads mapping into different genes using a gff file from the genome and a bam file of alignment
blast2cog
blast2interact
simple script to convert blast hits in csv files ready to fead cytoscape graph creator
eggNOG_drinker
Gene ontology search and assignment using eggNOG database
hi-c_helper_scripts
helper scripts for transformations of hi-c matrices or samfiles. Also contains scripts that helped transform data, or make input data to circos.
mass_merger
NGS_utilities
several scripts for simple bioinformatic tasks
R_little_scripts
Rapsearch2Xml
SpeciesSplit
Separation of sequences of 2 diferent species based on their homologies with other sequences.
Nymeria8's Repositories
Nymeria8/Rapsearch2Xml
Nymeria8/eggNOG_drinker
Gene ontology search and assignment using eggNOG database
Nymeria8/R_little_scripts
Nymeria8/bamzinga
Counts the number of reads mapping into different genes using a gff file from the genome and a bam file of alignment
Nymeria8/blast2cog
Nymeria8/blast2interact
simple script to convert blast hits in csv files ready to fead cytoscape graph creator
Nymeria8/hi-c_helper_scripts
helper scripts for transformations of hi-c matrices or samfiles. Also contains scripts that helped transform data, or make input data to circos.
Nymeria8/mass_merger
Nymeria8/NGS_utilities
several scripts for simple bioinformatic tasks
Nymeria8/SpeciesSplit
Separation of sequences of 2 diferent species based on their homologies with other sequences.
Nymeria8/splitreads
Script for identification of reads overlapping a rearrangement junction.
Nymeria8/Structure_threader
A simple program to paralelize the runs of the "Structure" software.
Nymeria8/SVInterpreter_update
Scripts to update SVInterpreter BDs