OHDSI/ETL-Synthea

Errors during Load Vocabularies

avtaylor opened this issue · 1 comments

There are errors during the loading of vocabularies due to Null values in the concepts csv file for the firls concept_name (a few fields are na) and the constraints on the table concepts does not allow NULL for that field.

A related question: will it work to load the vocabulary tables in a separate schema? and then use these across several OMOP sources? Say have syngthea data and anothe omop data in the same database in separate schema both using the same vocabularies?

All concepts must have the concept_name field populated. Ensure your vocabulary files are valid before loading.

It is a requirement that each CDM schema contains the vocabulary tables loaded with content to be considered a valid CDM that will work across all OHDSI tools.