The workflow for LFQ OOPS data processing using the data from Hoefig et al. 2020.
Data: Contains the data post processing in PD2.5 (Mouse_OOPS_Hoefig_PeptideGroups.txt)
Fasta files: contains the mouse proteome, features of proteins in the mouse proteome and common contaminants
Notebooks: Contains the RMD script for the data analysis
Results: Contains the mouse RBPs, mouse glycoproteins, and proteins post filtering