Can't get oauth_verifier
Closed this issue · 3 comments
chen1i6c04 commented
Hi
I download rMLST scheme with confindr_database_setup
, and also provide consumer key and consumer secret.
2023-11-14 09:06:32 Removing old databases...
2023-11-14 09:06:32 Downloading cgMLST-derived data for Escherichia, Salmonella, and Listeria...
2023-11-14 09:06:43 Since this is the first time you are using this database, it needs to be indexed by KMA. This might take a while
2023-11-14 09:06:53 Since this is the first time you are using this database, it needs to be indexed by KMA. This might take a while
2023-11-14 09:06:54 Since this is the first time you are using this database, it needs to be indexed by KMA. This might take a while
Visit this URL in your browser: http://pubmlst.org/cgi-bin/bigsdb/bigsdb.pl?db=pubmlst_rmlst_seqdef&page=authorizeClient&oauth_token=
Enter oauth_verifier from browser:
When I visit the URL, it show below
I can't get the oauth_verifier for download rMLST scheme
Do you have any idea?
pcrxn commented
Hi @chen1i6c04,
What is the full command that you're using with confindr_database_setup
? And, does your secret
file follow the format mentioned here?
i.e. Where the first line is the consumer key and the second line is the consumer secret:
efKXmqp2D0EBlMBkZaGC2lPf
F$M+fQ2AFFB2YBDfF9fpHF^qSWJdmmN%L4Fxf5Gur3
chen1i6c04 commented
Hi @pcrxn
I solved the issue, the reason is my system time is incorrect, so pubMLST reject the request.
It can work after I adjusted system time.
pcrxn commented
Ok, thank you for letting us know!