Issues
- 1
ConFindr error with trash data
#59 opened by happykhan - 1
Missing PercentContam in cgMLST mode
#58 opened by gputzel - 0
- 3
Can't get oauth_verifier
#56 opened by chen1i6c04 - 1
Error installing DB
#55 opened by shlomobl - 0
- 9
- 0
- 4
Docker Image
#51 opened by MrTomRod - 5
- 2
- 6
- 1
Keep running when rmlst.fasta is empty
#17 opened by duceppemo - 2
Error when running confindr.py
#18 opened by anacristinareis - 2
- 3
Error when attempting to run ConFindr on sample
#21 opened by connerse - 3
Single-end/Paired-end results discrepancies
#22 opened by fredericQC - 4
problems with confindr rMLSt database
#27 opened by KasiaTluscik - 5
- 16
ConFindr :: problem with bbtools
#30 opened by EricDeveaud - 7
- 2
- 2
Running ConFindr with weird internet access
#36 opened by lskatz - 5
Error while running kma
#40 opened by rafalkolenda - 2
Error while downloading cgMLST
#46 opened by ryobon-dev - 3
Error while running confinder
#45 opened by ryobon-dev - 3
bbtools error
#38 opened by annacorreia - 9
Error when running ConFindr on unusual oganisms
#42 opened by cjdgug - 2
E. coli db issue
#44 opened by elina2410 - 4
confindr_database_setup
#43 opened by joergFLI - 9
Issues setting up DB
#41 opened by juliofdiaz - 3
- 2
SamtoolsError
#26 opened by mdabalkey - 1
Hardcoded path to refseq.msh does no exists
#35 opened by bjhall - 3
Installation errors using conda/bioconda
#25 opened by ajkarloss - 2
Trimmed or Untrimmed reads?
#23 opened by vappiah - 8
input fasta
#19 opened by mdabalkey - 2
PackagesNotFoundError
#15 opened by wjidea - 5
kma exit status issue
#14 opened by pkmitchell - 1
- 2
- 3
Error: Encountered error when attempting to run ConFindr on sample X. Skipping...
#11 opened by ammaraziz - 3
- 3
DB location not writable
#9 opened by andersgs - 4
Xmx option
#8 opened by antunderwood - 2
- 2
incorrect SNP counting?
#4 opened by antunderwood