Pinned Repositories
biojazz
Evolve and Design Biochemical Reaction Networks (read related publication here: https://pubmed.ncbi.nlm.nih.gov/26101250/)
ChemChaste
CoSubstrateDynamics
Cyano_Gliding_ImageAnalysis_and_Model
Files associated with cyanobacteria gliding motility analysis using image processing and biophysical model
FBAhv
FBAhv: FBA analysis of host-virus metabolic model (read related publication at: https://www.life-science-alliance.org/content/4/1/e202000869)
MetQy
Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)
micodymora
Simulation framework for microbial population dynamics (read related publication here: https://royalsocietypublishing.org/doi/pdf/10.1098/rsif.2020.0053)
ModellingApHProbe
scaffoldTitration
To study different network motifs
STRONG_pipeline_avon
OSS Lab @ University of Warwick's Repositories
OSS-Lab/MetQy
Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)
OSS-Lab/micodymora
Simulation framework for microbial population dynamics (read related publication here: https://royalsocietypublishing.org/doi/pdf/10.1098/rsif.2020.0053)
OSS-Lab/biojazz
Evolve and Design Biochemical Reaction Networks (read related publication here: https://pubmed.ncbi.nlm.nih.gov/26101250/)
OSS-Lab/ChemChaste
OSS-Lab/CoSubstrateDynamics
OSS-Lab/FBAhv
FBAhv: FBA analysis of host-virus metabolic model (read related publication at: https://www.life-science-alliance.org/content/4/1/e202000869)
OSS-Lab/adaptiveNetworks
study of adaptive networks
OSS-Lab/anc
Mirror of ANC code
OSS-Lab/bistability
Project about bistability in signalling networks
OSS-Lab/chemotaxis-games
This repository contains simple scripts which can be used explore chemotaxis strategies used by bacteria.
OSS-Lab/Cyano_Gliding_ImageAnalysis_and_Model
Files associated with cyanobacteria gliding motility analysis using image processing and biophysical model
OSS-Lab/evolutionOfShapes
Simple processing script for shape evolution - user is selective force
OSS-Lab/facile
Mirror of facile code
OSS-Lab/fitnessFunctions
Plotting fitness functions for BioJazz models
OSS-Lab/ModellingApHProbe
OSS-Lab/scaffoldTitration
To study different network motifs
OSS-Lab/STRONG_pipeline_avon
OSS-Lab/ThT_CellularDistribution_ImagesAndModel
A simple model describing the membrane-potential dependent distribution of a cationic dye and subsequent binding of the dye in the cell
OSS-Lab/oss-lab.github.io
Webpage of code resources from OSS lab @ University of Warwick