Pinned Repositories
DICAST
Docker Integrated Comparison of Alternative Splicing (AS) Tools. Benchmarking AS tools and genomic alignment tools.
Alternative-Splicing-Tools
A list of alternative splicing analysis resources
ASimulatoR
ASimulatoR: splice-aware RNA-seq data simulation
datasharing
The Leek group guide to data sharing
MotifsSearch
In-lab cases of motifs search and manipulations
pairsamtools
CLI tools to process mapped Hi-C data
RNA-Seq_Depth_for_AS
This is a repository for the paper '200 million reads is the lower bound for comprehensive analysis of alternative splicing using short-read RNA-seq'
Sys_CARE
website
DESeq2
Differential expression of RNA-seq data using the Negative Binomial
OlgaVT's Repositories
OlgaVT/Alternative-Splicing-Tools
A list of alternative splicing analysis resources
OlgaVT/ASimulatoR
ASimulatoR: splice-aware RNA-seq data simulation
OlgaVT/datasharing
The Leek group guide to data sharing
OlgaVT/MotifsSearch
In-lab cases of motifs search and manipulations
OlgaVT/pairsamtools
CLI tools to process mapped Hi-C data
OlgaVT/RNA-Seq_Depth_for_AS
This is a repository for the paper '200 million reads is the lower bound for comprehensive analysis of alternative splicing using short-read RNA-seq'
OlgaVT/Sys_CARE
OlgaVT/website
OlgaVT/Alternative-splicing-in-mechanically-stretched-podocytes-as-a-model-of-glomerular-hypertension
OlgaVT/DIGGER
Fork for developing Digger 2.0