Pinned Repositories
angsd
Program for analysing NGS data.
sequoia
R package for pedigree inference based on SNP data
HiCBricks
HiCBricks offers user-friendly and efficient solutions for handling large high-resolution Hi-C datasets. The package provides a R/Bioconductor framework with the bricks to build more complex data analysis pipelines and algorithms.
Degeneracy
4folds and 0folds
miscscripts
various miscellaneous scripts for doing ~stuff~~~~~~
R_genetics_conv
R functions for conversion of genetic data formats
SNPFILT
vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
wtdbg2
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
OliverPStuart's Repositories
OliverPStuart/Degeneracy
4folds and 0folds
OliverPStuart/miscscripts
various miscellaneous scripts for doing ~stuff~~~~~~
OliverPStuart/R_genetics_conv
R functions for conversion of genetic data formats
OliverPStuart/SNPFILT
OliverPStuart/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis