Onto-Med Research Group
The Onto-Med Research Group conducts basic research in formal ontology, designs formal tools and develops top level, domain and core ontologies.
Leipzig
Pinned Repositories
COP
Core Ontology of Phenotyping
GFO
The General Formal Ontology is a top-level ontology for conceptual modeling. It includes elaborations of categories like objects, processes, time and space, properties, relations, roles, functions, facts, and situations.
GFO-2.0
General Formal Ontology (GFO) 2.0
OntoBrowser-Docker
Dockerized OntoBrowser
OWL2GraphML
Generates GraphML from OWL ontologies
PhenoMan-Editor
GUI to build and modify Phenotype Algorithm Specification Ontologies
SMOG
Spreadsheet Model Generator (SMOG): A Lightweight Tool for Object-Spreadsheet Mapping
top-api
REST API of the TOP Framework
top-deployment
Deployment instructions and resources for the TOP Framework
top-frontend
JavaScript based frontend of the TOP Framework
Onto-Med Research Group's Repositories
Onto-Med/GFO
The General Formal Ontology is a top-level ontology for conceptual modeling. It includes elaborations of categories like objects, processes, time and space, properties, relations, roles, functions, facts, and situations.
Onto-Med/OWL2GraphML
Generates GraphML from OWL ontologies
Onto-Med/SMOG
Spreadsheet Model Generator (SMOG): A Lightweight Tool for Object-Spreadsheet Mapping
Onto-Med/GFO-2.0
General Formal Ontology (GFO) 2.0
Onto-Med/binaryowl
A compact fast to parse and render format for OWL 2
Onto-Med/BISON
This repository contains the OWL files of the BIOPASS Situation Ontology.
Onto-Med/COP
Core Ontology of Phenotyping
Onto-Med/example-study-graphql-app
Mojolicious webapp with GraphQL to provided an API to browse study metadata
Onto-Med/OntoBrowser-Docker
Dockerized OntoBrowser
Onto-Med/PhenoMan-Editor
GUI to build and modify Phenotype Algorithm Specification Ontologies
Onto-Med/SOLID
A Drupal 8 Module to import OWL ontologies into Drupal.
Onto-Med/top-api
REST API of the TOP Framework
Onto-Med/top-deployment
Deployment instructions and resources for the TOP Framework
Onto-Med/top-frontend
JavaScript based frontend of the TOP Framework
Onto-Med/top.de
early draft of the web page for the TOP research group
Onto-Med/yolov5
YOLOv5 in PyTorch > ONNX > CoreML > TFLite
Onto-Med/.github
Contains a detailed description of the Onto-Med Research Group organization
Onto-Med/bubastis-semlex
Bubastis is an ontology diff tool
Onto-Med/concept-graphs
Onto-Med/gmds2024-evaluation
Onto-Med/phenoman-evaluation
Evaluation of the PhenoMan API with synthetic FHIR data
Onto-Med/RIO
Risk Identification Ontology (RIO) provides a framework for risk specification and reasoning.
Onto-Med/top-backend
Spring Boot based backend of the TOP Framework
Onto-Med/top-example-db
Very simple example for a database holding subject data. The data can be accessed via the TOP Framework.
Onto-Med/w3id.org
Website source code for w3id.org.