OpenMS

OpenMS is an open-source C++ software library for LC-MS data management and analysis

Pinned Repositories

autowrap
Generates Python Extension modules from Cythons PXD files
Language:C++73 12 8222
contrib
Automated CMake build scripts for the OpenMS contrib libraries
Language:CMake0 13 4221
dockerfiles
This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.
Language:Dockerfile2 14 68
OpenMS
The codebase of the OpenMS project
Language:C++478 32 3.2k313
OpenMS-docs
OpenMS Documentation.
Language:CSS2 6 11818
pyopenms-docs
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
Language:Python43 20 18253
pyopenms_viz
Streamlining Mass Spectrometry Data Visualization with Pandas
Language:Jupyter Notebook3 2 32
streamlit-template
Language:Python5 13 219
THIRDPARTY
External binary dependencies (e.g. search engine binaries) packaged in installers
1 18 1311
Tutorials
Tutorials as used in the user meetings. (Please assign a git tag for the revision used for the UM)
Language:TeX13 15 10219

OpenMS's Repositories

OpenMS/OpenMS
The codebase of the OpenMS project
Language:C++478 32 3.2k313
OpenMS/autowrap
Generates Python Extension modules from Cythons PXD files
Language:C++73 12 8222
OpenMS/pyopenms-docs
pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.
Language:Python43 20 18253
OpenMS/Tutorials
Tutorials as used in the user meetings. (Please assign a git tag for the revision used for the UM)
Language:TeX13 15 10219
OpenMS/streamlit-template
Language:Python5 13 219
OpenMS/MassBankUpdate
Language:Python3 9 11
OpenMS/pyopenms_viz
Streamlining Mass Spectrometry Data Visualization with Pandas
Language:Jupyter Notebook3 2 32
OpenMS/.github
OpenMS organization public GitHub profile repository
2 7 02
OpenMS/build-scripts
Holds the scripts for setting up basic platform specific (but machine independent) environments to build OpenMS for different purposes.
Language:CMake2 9 42
OpenMS/de.openms.knime
Nodes etc. related to OpenMS
Language:Java2 19 198
OpenMS/dockerfiles
This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.
Language:Dockerfile2 14 68
OpenMS/OpenMS-docs
OpenMS Documentation.
Language:CSS2 6 11818
OpenMS/usage_plots
Scripts for generating plots about the usage of OpenMS
Language:Python2 11 24
OpenMS/workflows
KNIME workflows for use with OpenMS.
2 12 34
OpenMS/NSIS
A ready-to-use NSIS with 8k strings support and ModernUI
1 8 0
OpenMS/PDCommunityNodes
Community nodes for Thermo Proteome Discoverer
Language:C#1 21 123
OpenMS/THIRDPARTY
External binary dependencies (e.g. search engine binaries) packaged in installers
1 18 1311
OpenMS/windows-installer
Former Windows Installer of OpenMS based on NSIS
Language:NSIS1 11 67
OpenMS/contrib
Automated CMake build scripts for the OpenMS contrib libraries
Language:CMake0 13 4221
OpenMS/OpenMS-website
Hugo sources for the OpenMS website
Language:HTML0 14 807
OpenMS/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell0 02
OpenMS/cling-notebooks
8 11
OpenMS/contrib-sources
Holds the packaged sources of chosen and tested versions of most of our needed contrib libraries.
10 0
OpenMS/images
Additional files (logos, splash screen, icons)
22 11
OpenMS/MetaboProfiler
Community Node for Compound Discoverer
Language:C#
OpenMS/OpenMS-1
The codebase of the OpenMS project
Language:C++0 0
OpenMS/openms.github.io
Code for our new webpage
Language:HTML
OpenMS/scientific-python-hugo-theme
Hugo theme based on the design for numpy.org
Language:HTML1 01
OpenMS/streamlit-deployment
Streamlit deployment with Docker
8 05
OpenMS/updateHMDB
Script to update OpenMS' internal HMDB database
Language:Python7 0