Pinned Repositories
arrow2
Unofficial transmute-free Rust library to work with the Arrow format
behaviour
ca-analysis-bloodflow
CHIPS
CHIPS, or Cellular and Hemodynamic Image Processing Suite, is an open-source MATLAB toolbox designed to analyse functional images of cells and blood vessels, primarily from two-photon microscopy. Please see the README file, which is displayed at the bottom of this page, for more information.
EP-analysis
Analyze the outputs of the EP algorithm
nalgebra-numpy
Convert between nalgebra and numpy types.
neural_collision_detection
Collide vasculature and neurons for fun and profit (?)
python-pysight
Create images and volumes from photon lists generated by a multiscaler
rpysight
Real-time 2D/3D rendering of photon streams from a TimeTagger
WideFlow
Live analysis of propagating waves in wide field imaging
PBLab's Repositories
PBLab/python-pysight
Create images and volumes from photon lists generated by a multiscaler
PBLab/neural_collision_detection
Collide vasculature and neurons for fun and profit (?)
PBLab/rpysight
Real-time 2D/3D rendering of photon streams from a TimeTagger
PBLab/arrow2
Unofficial transmute-free Rust library to work with the Arrow format
PBLab/behaviour
PBLab/ca-analysis-bloodflow
PBLab/CHIPS
CHIPS, or Cellular and Hemodynamic Image Processing Suite, is an open-source MATLAB toolbox designed to analyse functional images of cells and blood vessels, primarily from two-photon microscopy. Please see the README file, which is displayed at the bottom of this page, for more information.
PBLab/dff-calc
Calculate dF/F for neural traces, based on https://www.nature.com/articles/nprot.2010.169
PBLab/dm_optimization
Optimize laser wavefront using Alpao's DM69
PBLab/EP-analysis
Analyze the outputs of the EP algorithm
PBLab/Eran-Hagai-Project
PBLab/nalgebra-numpy
Convert between nalgebra and numpy types.
PBLab/napari
napari: a fast, interactive, multi-dimensional image viewer for python
PBLab/python-gsheet
Read and write data from Google Sheets
PBLab/vispy
Main repository for Vispy
PBLab/WideFlow
Live analysis of propagating waves in wide field imaging
PBLab/CVM
Continuous Volumetric Microscopy
PBLab/magicgui
build GUIs from python functions, using magic.
PBLab/napari-tutorials
tutorials for the napari image viewer