Pinned Repositories
16s_Figures_paper_plots
allbiotc2
Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.
Figures_neoantigen
flow-analysis-tutorial
A tutorial for the analysis of high-dimensional flow cytometry data
HLAtyping
Imubac_pipeline_Lymphoma
Scripts for running Cytek data using IMUBAC
Mouse_neoantigen
Mouse neoantigens from GRCm38 assembly using RNA
neoantigen_scripts
Scripts that are helpful in parsing
portal_files
Create WES cbioprotal files
radiomics_PDAC
Pamelanmrc's Repositories
Pamelanmrc/16s_Figures_paper_plots
Pamelanmrc/allbiotc2
Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.
Pamelanmrc/Figures_neoantigen
Pamelanmrc/flow-analysis-tutorial
A tutorial for the analysis of high-dimensional flow cytometry data
Pamelanmrc/HLAtyping
Pamelanmrc/Imubac_pipeline_Lymphoma
Scripts for running Cytek data using IMUBAC
Pamelanmrc/Mouse_neoantigen
Mouse neoantigens from GRCm38 assembly using RNA
Pamelanmrc/neoantigen_scripts
Scripts that are helpful in parsing
Pamelanmrc/portal_files
Create WES cbioprotal files
Pamelanmrc/radiomics_PDAC
Pamelanmrc/project_level_VCF
Merges VCFs which have genotype data into a matrix. Creates a project level VCF
Pamelanmrc/run_kallisto
Pamelanmrc/SVE
Structural Variation Engine
Pamelanmrc/TCGA_download
How to download TCGA data from GDC portal