Pinned Repositories
bakeoff
DonorCheck
Utility for validating donor typing entries to DonorNet
GenScorePipeline
Genetic Score Pipeline, Merge Extract Pipeline
IGV-VM
Build IGV instance that can take screenshots without a GUI or X11
igv-xvfb
IGV with Xvfb
jFlow
mosdepth-docker
NGS-PCA
Methods for running PCA on NGS data
NGS-TL
Estimate telomere length (TL) from whole genome sequencing (WGS)
warp
WDL Analysis Research Pipelines
PankratzLab's Repositories
PankratzLab/NGS-PCA
Methods for running PCA on NGS data
PankratzLab/bakeoff
PankratzLab/DonorCheck
Utility for validating donor typing entries to DonorNet
PankratzLab/GenScorePipeline
Genetic Score Pipeline, Merge Extract Pipeline
PankratzLab/NGS-TL
Estimate telomere length (TL) from whole genome sequencing (WGS)
PankratzLab/cue
Deep learning framework for SV calling and genotyping
PankratzLab/ExomeDepthExample
Example for running exomeDepth
PankratzLab/Genvisis-Docs
Documentation for Genvisis
PankratzLab/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
PankratzLab/IGV-snapshot-automator
Script to automatically create and run IGV snapshot batchscripts
PankratzLab/IGV-VM
Build IGV instance that can take screenshots without a GUI or X11
PankratzLab/igv-xvfb
IGV with Xvfb
PankratzLab/jFlow
PankratzLab/MatchSamples
PankratzLab/mosdepth-docker
PankratzLab/NativeJFileChooser
Native file chooser for Swing using JavaFX if available
PankratzLab/SuperNovo
DeNovo Mutation Identification and Validation
PankratzLab/warp
WDL Analysis Research Pipelines
PankratzLab/Genvisis-Website
Text and images for the Genvisis webpage
PankratzLab/kd-match
kd-tree matching for nearest neighbor selection
PankratzLab/long-read-plot
Plots for long read sequencing data
PankratzLab/pankratzlab.github.io
PankratzLab/RUFUS
RUFUS k-mer based genomic variant detection