PathVisio

Pathway editor, analysis and visualization software

Pinned Repositories

biopax-plugin
PathVisio plugin to import and export pathways in BioPAX format
Language:Web Ontology Language1 3 13
GPML
Graphical Pathway Markup Language
Language:Python5 4 833
libGPML
Java library for reading / writing GPML files
Language:Java2 3 164
org.pathvisio.typeconverter
Enables the conversion of pathway elements into other types (e.g. Label into Metabolite)
Language:Java1 4 51
pathvisio
PathVisio - pathway editor, visualization and analysis software
Language:Java23 9 15521
pathvisio-book
:book: PathVisio
Language:HTML3 3 13
PathVisioRPC
PathVisioRPC is an XML-RPC implementation of PathVisio that allows users to create and edit biological pathways, visualize data on pathways, perform pathway statistics and exports results in various image formats. Since most major programming languages have a library/module providing XML-RPC functionality, this application enables users to access PathVisio functionality from their favourite analytical environment.
Language:Java8 8 95
RegInt-Plugin
Visualize regulatory interactions in the side panel of PathVisio
Language:Java1 3 01
RPathVisio
R package for PathVisioRPC
Language:R2 9 34
WP-plugin
Plugin for PathVisio that provides a WikiPathways client.
Language:Java1 6 175

PathVisio's Repositories

PathVisio/pathvisio
PathVisio - pathway editor, visualization and analysis software
Language:Java23 9 15521
PathVisio/PathVisioRPC
PathVisioRPC is an XML-RPC implementation of PathVisio that allows users to create and edit biological pathways, visualize data on pathways, perform pathway statistics and exports results in various image formats. Since most major programming languages have a library/module providing XML-RPC functionality, this application enables users to access PathVisio functionality from their favourite analytical environment.
Language:Java8 8 95
PathVisio/GPML
Graphical Pathway Markup Language
Language:Python5 4 833
PathVisio/pathvisio-book
:book: PathVisio
Language:HTML3 3 13
PathVisio/libGPML
Java library for reading / writing GPML files
Language:Java2 3 164
PathVisio/RPathVisio
R package for PathVisioRPC
Language:R2 9 34
PathVisio/biopax-plugin
PathVisio plugin to import and export pathways in BioPAX format
Language:Web Ontology Language1 3 13
PathVisio/FindYourInteraction
PathVisio plugin to find relevant metabolic reactions from Rhea
Language:Java1 3 11
PathVisio/org.pathvisio.typeconverter
Enables the conversion of pathway elements into other types (e.g. Label into Metabolite)
Language:Java1 4 51
PathVisio/RegInt-Plugin
Visualize regulatory interactions in the side panel of PathVisio
Language:Java1 3 01
PathVisio/WP-plugin
Plugin for PathVisio that provides a WikiPathways client.
Language:Java1 6 175
PathVisio/BH2021
0 2 00
PathVisio/libGPML-old
library to read/write GPML
Language:Java0 4 204
PathVisio/pathvisio.github.io
PathVisio website and tutorials (under development)
Language:HTML0 4 104
PathVisio/pathvisio4-ant
Language:Java0 3 413
PathVisio/GO-plugin
Language:Java3 0
PathVisio/GSEA-plugin
GSEA plugin for PathVisio
Language:Java5 11
PathVisio/homology.mapper
GPML Homology Mapper
Language:Java4 42
PathVisio/libgpml-javadoc
libGPML Java documentation
Language:HTML2 0
PathVisio/mappbuilder
MAPPBuilder plugin for PathVisio
Language:Java4 52
PathVisio/MiPaSt
miRNA pathway statistics plugin for PathVisio
Language:Java3 0
PathVisio/org.pathvisio.tissueanalyzer
Tissue Analyser Plugin
Language:Java4 181
PathVisio/OSSRH-73582
2 0
PathVisio/pathvisio4-maven
Language:Java2 0
PathVisio/PathwayLoom
PathwayLoom plugin for PathVisio
Language:Java4 01
PathVisio/plugin-repo
Plugin repository for PathVisio
Language:HTML
PathVisio/pv-minimap
Plugin for PathVisio that adds a MiniMap side panel for navigation in large pathways
3 01
PathVisio/tutorials
Tutorials and workshop material for PathVisio
3 03