PelFritz
Currently PhD in Bioinformatics with interest in Machine and Deep Learning
Leibniz Institut of Plant Genetics and Crop Plant ResearchGermany
Pinned Repositories
deeplift
Public facing deeplift repo
DeepCRE
Deep learning the cis-regulatory code for gene expression in selected model plants
app_deepCRE
This repository host the deeCRE app built using streamlit
app_DGE
This app helps perform differential expression analysis. Built with streamlit
Barley_HEB25_Project
Scripts for the HEB25_population
bulk-rna-seq-hisat2-pipeline
This directory contains nextflow based pipeline for RNA-seq analysis with HISAT2
DeepCistrome
In this project we use deep learning to model protein-DNA binding using ChIP-seq and the novel MOA-seq technology
DeepCRE
This project contains code used in my work on predicting gene expression from cis-regulatory sequences
Master_project
Prediction of relative gene expression in Arabidopsis thaliana using a convolutional neural network
ml-for-biologist
This repository contains short projects to introduce biologist or novice bioinformatics scientist to machine learning
PelFritz's Repositories
PelFritz/ml-for-biologist
This repository contains short projects to introduce biologist or novice bioinformatics scientist to machine learning
PelFritz/app_deepCRE
This repository host the deeCRE app built using streamlit
PelFritz/app_DGE
This app helps perform differential expression analysis. Built with streamlit
PelFritz/Barley_HEB25_Project
Scripts for the HEB25_population
PelFritz/bulk-rna-seq-hisat2-pipeline
This directory contains nextflow based pipeline for RNA-seq analysis with HISAT2
PelFritz/DeepCistrome
In this project we use deep learning to model protein-DNA binding using ChIP-seq and the novel MOA-seq technology
PelFritz/DeepCRE
This project contains code used in my work on predicting gene expression from cis-regulatory sequences
PelFritz/Master_project
Prediction of relative gene expression in Arabidopsis thaliana using a convolutional neural network