Pinned Repositories
gephi
Gephi - The Open Graph Viz Platform
AutoMerriamQuiz
Python code to automatically take vocabulary quiz on Merriam Webster website and store the results of every trial in a csv
cadnano2
Cadnano2
Managesimulations
Bash script to manage simulation in a directory.
oxDNA-get_distance_data
This program goes over different simulation folders and combines the distance data files into one and then plots it against the total time of the simulations
oxDNA-get_hydrogenbonds
This script reads the baby output bonds file and gives a text file with the time steps column added and another text file giving the HB bonds count for each time step i.e. configuration
Prateek1410
Config files for my GitHub profile.
processingfastafile
This program provides certain sequence related details of a fasta sequence (done as part of genomic data science coursework)
textgrid_from_cadnano
This program takes the cadnano json file along with the sequence file (.csv) to generate an mxn grid of the nucleotides for oxDNA simulations.
scipy
SciPy library main repository
Prateek1410's Repositories
Prateek1410/AutoMerriamQuiz
Python code to automatically take vocabulary quiz on Merriam Webster website and store the results of every trial in a csv
Prateek1410/cadnano2
Cadnano2
Prateek1410/Managesimulations
Bash script to manage simulation in a directory.
Prateek1410/oxDNA-get_distance_data
This program goes over different simulation folders and combines the distance data files into one and then plots it against the total time of the simulations
Prateek1410/oxDNA-get_hydrogenbonds
This script reads the baby output bonds file and gives a text file with the time steps column added and another text file giving the HB bonds count for each time step i.e. configuration
Prateek1410/Prateek1410
Config files for my GitHub profile.
Prateek1410/processingfastafile
This program provides certain sequence related details of a fasta sequence (done as part of genomic data science coursework)
Prateek1410/textgrid_from_cadnano
This program takes the cadnano json file along with the sequence file (.csv) to generate an mxn grid of the nucleotides for oxDNA simulations.