Pinned Repositories
mitochondria_mutation_accumulation
pksPrediction
All code needed to train and use the random forest model to predict whether a specific mutation is colibactin induced. Code to produce the figures in the associated manuscript also provided.
PTATO
Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox
colibactin_detection
fetalChemo
TallFlow
Code for all analysis performed to study T-ALL using flow cytometry data
Team van Boxtel @ Princess Maxima Center's Repositories
ProjectsVanBox/TallFlow
Code for all analysis performed to study T-ALL using flow cytometry data
ProjectsVanBox/fetalChemo
ProjectsVanBox/colibactin_detection
ProjectsVanBox/PTATO
Comprehensive single-cell genome analysis at nucleotide resolution using the PTA Analysis Toolbox
ProjectsVanBox/mitochondria_mutation_accumulation
ProjectsVanBox/pksPrediction
All code needed to train and use the random forest model to predict whether a specific mutation is colibactin induced. Code to produce the figures in the associated manuscript also provided.