QiuyuLian

QiuyuLian's Stars

• cxzhu/Paired-Tag

  Analysis of Paired-Tag datasets

  Language:C++3814

• ShusenTang/Dive-into-DL-PyTorch

  本项目将《动手学深度学习》(Dive into Deep Learning)原书中的MXNet实现改为PyTorch实现。

  Language:Jupyter Notebook18.2k5.4k

• ludvigla/murine_colon_explorer

  Language:R63

• xinzhu-email/Pantheon

  Language:Python3

• aertslab/SCENICprotocol

  A scalable SCENIC workflow for single-cell gene regulatory network analysis

  Language:Python13961

• adamjamesreid/gurdon-bioinformatics

  2

• zqrong/pyDIMM

  A Python Dirichlet Multinomial Mixture Model.

  Language:Python8

• avehtari/BDA_py_demos

  Bayesian Data Analysis demos for Python

  Language:Jupyter Notebook993300

• CamDavidsonPilon/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers

  aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

  Language:Jupyter Notebook26.7k7.9k

• Nat-D/GMVAE

  Deep Unsupervised Clustering with Gaussian Mixture Variational Autoencoders

  Language:Lua21052

• drieslab/Giotto

  Spatial omics analysis toolbox

  Language:R25898

• xunzheng/notears

  DAGs with NO TEARS: Continuous Optimization for Structure Learning

  Language:Python594133

• fishmoon1234/awesome-causality-algorithms

  An index of algorithms for learning causality with data

  64

• imsb-uke/scGAN

  Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks

  Language:Python7525

• eriklindernoren/PyTorch-GAN

  PyTorch implementations of Generative Adversarial Networks.

  Language:Python16.3k4.1k

• kurowasan/GraN-DAG

  Language:C++8624

• fishmoon1234/DAG-GNN

  Language:Python28670

• Murali-group/Beeline

  BEELINE: evaluation of algorithms for gene regulatory network inference

  Language:Python17053

• jmschrei/pomegranate

  Fast, flexible and easy to use probabilistic modelling in Python.

  Language:Python3.4k589

• utkuozbulak/pytorch-custom-dataset-examples

  Some custom dataset examples for PyTorch

  Language:Python862116

• vals/Blog

  Language:Jupyter Notebook379

• 10XGenomics/single-cell-3prime-paper

  Language:R8335

• MorvanZhou/PyTorch-Tutorial

  Build your neural network easy and fast, 莫烦Python中文教学

  Language:Jupyter Notebook8.1k3.1k

• scverse/scvi-tools

  Deep probabilistic analysis of single-cell and spatial omics data

  Language:Python1.2k344

• quon-titative-biology/scAlign

  A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batches

  Language:R3412

• theislab/dca

  Deep count autoencoder for denoising scRNA-seq data

  Language:Python24772

• klarman-cell-observatory/scPhere

  Language:Python9614

• shahcompbio/scvis

  Python package for dimension reduction of high-dimensional biological data.

  Language:Python165

• KrishnaswamyLab/SAUCIE

  Language:Python9829

• hunkim/PyTorchZeroToAll

  Simple PyTorch Tutorials Zero to ALL!

  Language:Python3.9k1.2k