RNA-Puzzles
RNA-Puzzles: A CASP-like evaluation of RNA three-dimensional structure prediction
Strasbourg, Cambridge
Pinned Repositories
comparison_metrics_list
Assessment metrics tools to compare RNA 3D structures.
Deformation_Profile
RNA deformation profile, to account for structure comparison in 2D
mcq4structures
A parent project for a set of subprojects related to Mean of Circular Quantities (MCQ).
raw_dataset_and_for_assessment
This repository includes all the submitted RNA structures in RNA-Puzzles, include the `raw_dataset` and the `normalized_dataset`
rna-tools
🔧rna-tools (prev. rna-pdb-tools): a toolbox to analyze sequences, structures and simulations of RNA - docs @ http://rna-tools.rtfd.io web version http://rna-tools.online
RNA_assessment
Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils.
RNA_format
The submission format of RNA-Puzzles
rnaqua
standardized_dataset
Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip
toolkit-ansible-role
Ansible role for RNA-Puzzles Toolkit. Contains ansible-container config and an example playbook
RNA-Puzzles's Repositories
RNA-Puzzles/RNA_assessment
Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils.
RNA-Puzzles/standardized_dataset
Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/archive/master.zip
RNA-Puzzles/rna-tools
🔧rna-tools (prev. rna-pdb-tools): a toolbox to analyze sequences, structures and simulations of RNA - docs @ http://rna-tools.rtfd.io web version http://rna-tools.online
RNA-Puzzles/comparison_metrics_list
Assessment metrics tools to compare RNA 3D structures.
RNA-Puzzles/rnaqua
RNA-Puzzles/toolkit-ansible-role
Ansible role for RNA-Puzzles Toolkit. Contains ansible-container config and an example playbook
RNA-Puzzles/Deformation_Profile
RNA deformation profile, to account for structure comparison in 2D
RNA-Puzzles/mcq4structures
A parent project for a set of subprojects related to Mean of Circular Quantities (MCQ).
RNA-Puzzles/raw_dataset_and_for_assessment
This repository includes all the submitted RNA structures in RNA-Puzzles, include the `raw_dataset` and the `normalized_dataset`
RNA-Puzzles/RNA-Puzzles-toolkit-overview
RNA-Puzzles-toolkit-overview
RNA-Puzzles/RNA_format
The submission format of RNA-Puzzles
RNA-Puzzles/RoundV_reproducibility
RNA-Puzzles/viralcentre.github.io
A ribozyme database