RRafiee
Lecturer in Data Analytics and Machine Learning - Queen's University Belfast
Queen's University BelfastUK
Pinned Repositories
Association
Finding association between clinical, pathological and molecular features
Bioconductor-GenomicDataCommons
Genomic Data Commons Query
ClickTube
Youtube video discovery system
Data-Analysis-and-Visualisation
Data Analysis and Visualisation
Gaussian-mixture-modelling
Gaussian mixture modelling - Unsupervised learning
GenomeAnalysisToolkit
Genome Analysis Toolkit
Omics
Useful 'Omics' tools which you may need to know when doing bioinformatics
Programming_Tips
R Programming Tips and more
SurvivalAnalysis
Survival modelling using Cox proportional hazard regression model
XHMM
eXome Hidden Markov model (XHMM) - Copy Number Variants (CNVs) from Whole Exome Sequencing Data
RRafiee's Repositories
RRafiee/XHMM
eXome Hidden Markov model (XHMM) - Copy Number Variants (CNVs) from Whole Exome Sequencing Data
RRafiee/Gaussian-mixture-modelling
Gaussian mixture modelling - Unsupervised learning
RRafiee/SurvivalAnalysis
Survival modelling using Cox proportional hazard regression model
RRafiee/Data-Analysis-and-Visualisation
Data Analysis and Visualisation
RRafiee/Association
Finding association between clinical, pathological and molecular features
RRafiee/Bioconductor-GenomicDataCommons
Genomic Data Commons Query
RRafiee/GenomeAnalysisToolkit
Genome Analysis Toolkit
RRafiee/Omics
Useful 'Omics' tools which you may need to know when doing bioinformatics
RRafiee/ClickTube
Youtube video discovery system
RRafiee/Programming_Tips
R Programming Tips and more
RRafiee/GeneExpressionClassification
NanoString classifier based on NGS training set
RRafiee/ICST
ICST: Immune-based Classification of Solid Tumours
RRafiee/ImmunoGenomics
The Immunogenomics Data Analysis
RRafiee/MIMIC
Minimal methylation classifier (MIMIC): A novel method for derivation and rapid diagnostic detection of disease-associated DNA methylation signatures - We describe the development and validation of minimal methylation classifier (MIMIC), combining CpG signature design from genome-wide datasets, multiplex-PCR and detection by single-base extension and MALDI-TOF mass spectrometry, in a novel method to assess multi-locus DNA methylation profiles within routine clinically-applicable assays.
RRafiee/MuTect1
RRafiee/NIMBLE
NanostrIng MB cLassifiEr
RRafiee/NSCLC
Development and validation of a robust RNA-seq based prognostic signature in non-small cell lung cancer
RRafiee/shiny-server
shiny-server main code