/diabetes-simbackend-only

Primary LanguagePython

Comprehensive Diabetes Model

This microsimulation project aims to study the effects of various interventions on diabetes prevalence.

PI: Tom Hoerger Code: Rainer Hilscher

Requirements

  • Python 3.8+ (3.8 - 3.10 have been successfully tested)
  • See requirements.txt for Python packages that need to be installed
  • The analysis script in particular makes use of Pandas

Usage

  • Use python run-model.py [scenario name] to execute the model
  • Scenario files need to be placed in the ./scenarios folder
  • Custom built scenario files need to contain the exact same variables as the ones listed in the same scenario files

to run the 't2d-final-glyco_basic.json' scenario

  • Example: python run-model.py t2d-final-glyco_basic

to only run a specific stage

  • Example: python run-model.py t2d-final-glyco_basic --stages=analysis
  • Possible stages: {population, simulation, analysis}