RaSieb

@ssi-dk Denmark/Switzerland

Pinned Repositories

batchMykrobe
These scripts allow to run "Mykrobe Predictor staph" and "Mykrobe genotype" in parallel for batches of sequence reads
Language:Python0 1 00
covid19
Bioinformatic pipelines used to assemble SARS-CoV-2 genomes from DK
Language:Python0 0 00
panaroo
An updated pipeline for pangenome investigation
Language:Python0 0 00
small-R-scripts
Small scripts in R
Language:R0 1 00
CC398_global_phylogeny
Preliminary work of CC398 global phylogeny
0 3 00
GenEpi-BioTrain_Virtual_Training_7
All data used in the GenEpi-BioTrain Virtual Training 7 session on march 19-20, 2024
Language:Python5 4 10
N_Meningitidis_CC11_SgC_SgW
Neisseria Meningitidis CC11 SgC and SgW Nextstrain project
Language:Python0 4 00
S_aureus_CC9_host_association
Preliminary data, for internal use only!
Language:Python0 4 00

RaSieb's Repositories

RaSieb/batchMykrobe
These scripts allow to run "Mykrobe Predictor staph" and "Mykrobe genotype" in parallel for batches of sequence reads
Language:Python0 1 00
RaSieb/covid19
Bioinformatic pipelines used to assemble SARS-CoV-2 genomes from DK
Language:Python0 0 00
RaSieb/panaroo
An updated pipeline for pangenome investigation
Language:Python0 0 00
RaSieb/small-R-scripts
Small scripts in R
Language:R0 1 00