Pinned Repositories
ants_tumour_analysis
wrappers for using ANTs with tumour data
app-conn-preprocessing
fMRI preprocessing via CONN
BIDS_fMRI_scripts
CPP Analysis scripts for fMRI datasets prepared in BIDS format
Dcm2Bids
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
denoiser
Nuisance removal tool for fMRI data
dicomSort
DICOM sorting utility
easy_lausanne
Easy creation of Lausanne2008 atlases
FastSurfer
PyTorch implementation of FastSurferCNN
fsl_sub
parallel FSL processing without requiring SGE
Rad-dude's Repositories
Rad-dude/ants_tumour_analysis
wrappers for using ANTs with tumour data
Rad-dude/app-conn-preprocessing
fMRI preprocessing via CONN
Rad-dude/BIDS_fMRI_scripts
CPP Analysis scripts for fMRI datasets prepared in BIDS format
Rad-dude/Dcm2Bids
Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
Rad-dude/denoiser
Nuisance removal tool for fMRI data
Rad-dude/dicomSort
DICOM sorting utility
Rad-dude/easy_lausanne
Easy creation of Lausanne2008 atlases
Rad-dude/FastSurfer
PyTorch implementation of FastSurferCNN
Rad-dude/fsl_sub
parallel FSL processing without requiring SGE
Rad-dude/HCP-analysis
Scripts to automate processing of HCP data
Rad-dude/KUL_NIS
KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.
Rad-dude/liquidctl
Cross-platform CLI and Python drivers for AIO liquid coolers and other devices
Rad-dude/MALPEM
MALPEM whole-brain segmentation framework
Rad-dude/MRIToolkit
Rad-dude/MTLE-HS-new
specifically for simple DTI of HS data
Rad-dude/MTLE_HS-script
Carries out T1 and DTI preproc and analysis with ANTs and MRTRIX3
Rad-dude/multiscalebrainparcellator
Multi-Scale Brain Parcellator, part of the Connectome Mapping Toolkit (CMTK), is a BIDS App that implements a full anatomical MRI processing pipeline, from raw T1w data to structural brain parcellation at five different scales.
Rad-dude/niimath
niimath - a clone of fslmaths
Rad-dude/NSPN_CODE
Code written for the NSPN project
Rad-dude/python_intro
A short introduction into Python
Rad-dude/scilpy
The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
Rad-dude/shard-recon
MRtrix3 module for motion correction and scattered slice reconstruction in multi-shell diffusion MRI.
Rad-dude/Split_3D_atlas_2_4D
Small Matlab script to split up a 3D image of labels to 4D
Rad-dude/Synb0-DISCO
Rad-dude/test-git
testing
Rad-dude/TtoZ
Convert T score brain statistical map to Z score map
Rad-dude/VTK-OBJ
From VTK to OBJ wavefront converter