RahmanTeamDevelopment/CoverView

Issues

• Coverview not installed properly

  #23 opened 2 years ago
  0

• Setting the host and port to something different than localhost:5000

  #22 opened 4 years ago
  0

• ERROR: pytest-cov 2.7.1 has requirement pytest>=3.6, but you'll have pytest 3.0.7 which is incompatible.

  #21 opened 5 years ago
  2

• install.sh compilation error

  #20 opened 5 years ago
  0

• CoverView counts unmapped reads differently to old version

  #19 opened 7 years ago
  1

• Validate JSON configuration options

  #18 opened 7 years ago
  2

• Reads Array Does Not Handle Unmapped Reads Correctly

  #17 opened 7 years ago
  0

• Validate Configuration Input File

  #16 opened 7 years ago
  1

• doc/ directory for documentation

  #15 opened 7 years ago
  0

• coverview script fails when run from any directory except top-level CoverView directory

  #14 opened 7 years ago
  2

• CoverView hangs when loading reads into in-memory buffer

  #13 opened 7 years ago
  0

• CoverView fails when directional coverage output is requested

  #12 opened 7 years ago
  0

• CoverView fails when pass criteria is set in config

  #11 opened 7 years ago
  0

• CoverView gives an error when the GUI output is requested

  #10 opened 7 years ago
  0

• Create sensibly-named scripts for running unit-tests, regression tests, smoke tests etc

  #9 opened 7 years ago
  0

• Add unset PYTHONPATH to all scripts

  #8 opened 7 years ago
  0

• Pysam installed twice

  #7 opened 7 years ago
  0

• Control what is included in the distributed version using a MANIFEST file

  #6 opened 7 years ago
  0

• Change structure of test/ directory

  #5 opened 7 years ago
  0

• Rename configure.sh as install.sh

  #4 opened 7 years ago
  0

• Standardise use of chromosome labels in input and output

  #3 opened 7 years ago
  0

• Unset $PYTHONPATH when running CoverView

  #2 opened 7 years ago
  1

• Installation should run in different shells other than bash

  #1 opened 7 years ago
  2