Pinned Repositories
atlas
flareplot
Visualizing temporal networks
D3Matrix
Display matrices with D3
d3RangeSlider
JQuery-drag range slider - widget to select a range of numbers
EMEval
Evaluate fit of PDB/mmCif to a Cryo EM map
ESMT-heuristic
Heuristic for the Eucliean Steiner Minimal Tree problem
ESMT-Smith
Smiths algorithm for the Euclidean Steiner Minimal Tree problem
PDBCluster
K-medoids and K-centers clustering of PDB files (RNA/DNA/protein)
SVDcomparison
Quick-and-dirty running time comparison between singular value decomposition (SVD) computations using three popular libraries -- GSL, MKL, and CUDA
RasmusFonseca's Repositories
RasmusFonseca/d3RangeSlider
JQuery-drag range slider - widget to select a range of numbers
RasmusFonseca/PDBCluster
K-medoids and K-centers clustering of PDB files (RNA/DNA/protein)
RasmusFonseca/EMEval
Evaluate fit of PDB/mmCif to a Cryo EM map
RasmusFonseca/EvoBundle
Bundle visualization that evolves
RasmusFonseca/SimCityOpt
Computation of optimal layout in simplified SimCity map
RasmusFonseca/D3Matrix
Display matrices with D3
RasmusFonseca/AcademicGraph
Analysis / visualization of academic citation graphs
RasmusFonseca/biopython
Official git repository for Biopython (converted from CVS)
RasmusFonseca/byobu
git mirror of upstream bzr at http://launchpad.net/byobu
RasmusFonseca/cdhit
Automatically exported from code.google.com/p/cdhit
RasmusFonseca/GTD
RasmusFonseca/JSGraphCommunity
RasmusFonseca/jsLPSolver
Simple OOP javaScript library to solve linear programs, and mixed integer linear programs
RasmusFonseca/JSRangeSlider
Javascript range slider
RasmusFonseca/md_scripts
Collection of MD scripts for different software packages
RasmusFonseca/MDCompare
RasmusFonseca/mdtraj
A modern, open library for the analysis of molecular dynamics trajectories
RasmusFonseca/MeetGreet
RasmusFonseca/ml5-website
ml5.js website
RasmusFonseca/ngl
WebGL protein viewer
RasmusFonseca/Processing
Small processing projects
RasmusFonseca/protwis
RasmusFonseca/RasmusFonseca.github.io
RasmusFonseca/Scrapers
Code relating to Scraping.
RasmusFonseca/SfParkVis
RasmusFonseca/tactile
Tactile is a Jekyll theme for GitHub Pages
RasmusFonseca/TICC
RasmusFonseca/TranscriptionFactors
RasmusFonseca/vmd-python
Installable VMD as a python module
RasmusFonseca/webpack.js.org
New repository for webpack documentation and more!