Rekyt
Assistant Professor of Biostatistics & Ecology
Université Grenoble Alpes / Laboratoire d'Écologie Alpine (LECA)Grenoble, France
Pinned Repositories
funbiogeo
:package: R package to help with analyses in functional biogeography
fundiversity
📦 R package to compute functional diversity indices efficiently
courses_and_workshops
:clipboard: A list of GitHub repositories with courses and workshops I created or have contributed to
funrar
:package: R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)
mamm_funrar
Tutorial to compute functional rarity indices with funrar using North American Mammals
rtaxref
:package: R client to the API of French Taxonomical Reference (TAXREF)
taxo_harmonization
:notebook: Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practices" preprint: 10.32942/osf.io/e3qnz
rromeo
:package: An R client for SHERPA/RoMEO API V1
Rekyt's Repositories
Rekyt/funrar
:package: R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)
Rekyt/taxo_harmonization
:notebook: Companion code for Grenié et al. 2022 MEE "Harmonizing taxon names in biodiversity data: a review of tools, databases, and best practices" preprint: 10.32942/osf.io/e3qnz
Rekyt/rtaxref
:package: R client to the API of French Taxonomical Reference (TAXREF)
Rekyt/courses_and_workshops
:clipboard: A list of GitHub repositories with courses and workshops I created or have contributed to
Rekyt/automated_trait_retrieval
Collection of software to automatically retrieve species functional trait data from databases. R packages, Python and Julia modules.
Rekyt/biodiversity_facets_tutorial
Repository for practical session on "Biodiversity facets in macro-space" https://s.42l.fr/biodiv https://s.42l.fr/nulldata
Rekyt/IUCNN
Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of "Not Evaluated" or "Data Deficient" species, for any taxon or geographic region of interest.
Rekyt/rekyt.github.io
Repo containing my published personal website
Rekyt/APD
The Australian Plant Traits Dictionary
Rekyt/Bayesian-Statistics
This repository holds slides and code for a full Bayesian statistics graduate course.
Rekyt/blog
The R-hub blog
Rekyt/blogdown_source
Source for rekyt.github.io
Rekyt/crocodiles_funrar
Testing relationship between extinction risk and functional distinctiveness
Rekyt/dimensionality
Rekyt/fdcoexist
:notebook: Research compendium for Denelle, Grenié et al. - Multi-species Trait-based Coexistence Model in discrete time
Rekyt/fddimensionality_ms
:notebook: Compendium with companion code of Grenié et al. "When more is less: adding more traits dilutes the functional diversity-environment relationship"
Rekyt/funbiogeo_may_summary_2023
📃 Summary about 'funbiogeo' from May 2023
Rekyt/fundiversity_sdiv_presentation
📃 Presentation given in the context of the sDiv lab meeting on fundiversity
Rekyt/GIFT
Functions to extract data from Global Inventory of Floras and Traits (GIFT)
Rekyt/highcharter
R wrapper for highcharts
Rekyt/hillR
An R pakage to calculate diversity through Hill Numbers
Rekyt/l3_project
Repo to hold datasets for L3 project
Rekyt/mFD
:package: A Computation of Functional Spaces and Functional Diversity Indices
Rekyt/new_cv
Updated repo for CV
Rekyt/performance
:muscle: Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)
Rekyt/poster_alientraitgaps_sfe_metz_2022
Poster on Gaps in Alien Species Trait Data from SFE²-GfÖ-EEF Joint Conference in Metz 2022
Rekyt/rekyt.r-universe.dev
R-universe base repo
Rekyt/roweb3
rOpenSci website source
Rekyt/taxonomic_harmonization_lecture
:page_with_curl: Lecture on Taxonomic Harmonization given at the NFDI4Biodiv & GfÖ Winter School 2022
Rekyt/virtuoso
:package: Interact with Virtuoso Open Source database instances from R