RobertBakaric

Bioinformatics expert

Pinned Repositories

Bakaric-CV
Curriculum Vitae
0 2 00
BenchLite
Simple CLI benchmarking tool
Language:Perl0 2 01
BWT-perl
Simple Perl Burrows Wheeler Transform Computation Tool
Language:Perl0 2 00
CliMax
Maximal Clique Computation tool
Language:C++0 2 00
EulerTour
Euler Tour Tree Representation
Language:C++71
FastaPlus
Fasta File container
Language:C++1 2 00
fhead
equivalent of linux head function for fasta files
Language:C++0 2 00
GraphMan
Graph Manipulation Tool
Language:C++00
MinVexCov
Minimum vertex cover list heuristic with static ordering
Language:C++1 2 00
rmmq
Range minimum and maximum query computation
Language:C++30

RobertBakaric's Repositories

RobertBakaric/EulerTour
Euler Tour Tree Representation
Language:C++71
RobertBakaric/rmmq
Range minimum and maximum query computation
Language:C++30
RobertBakaric/FastaPlus
Fasta File container
Language:C++1 2 00
RobertBakaric/MinVexCov
Minimum vertex cover list heuristic with static ordering
Language:C++1 2 00
RobertBakaric/Bakaric-CV
Curriculum Vitae
0 2 00
RobertBakaric/BenchLite
Simple CLI benchmarking tool
Language:Perl0 2 01
RobertBakaric/BWT-perl
Simple Perl Burrows Wheeler Transform Computation Tool
Language:Perl0 2 00
RobertBakaric/CliMax
Maximal Clique Computation tool
Language:C++0 2 00
RobertBakaric/fhead
equivalent of linux head function for fasta files
Language:C++0 2 00
RobertBakaric/GraphMan
Graph Manipulation Tool
Language:C++00
RobertBakaric/LCP-perl
Perl scripts for computing the longest common prefix array
Language:Perl
RobertBakaric/LCPKasai
Longest common prefix computation tool
Language:C++3 11
RobertBakaric/PhyComplex
Simple sequence physical complexity calculator
Language:Perl2 0
RobertBakaric/PiedPiper
Language:Perl
RobertBakaric/rust-FileOperator
Rust module for operating individual text files and/or simplified text database where data is stored in flat text files
Language:Makefile
RobertBakaric/rust_git_live_stream
RobertBakaric/samXbam
sam2bam/bam2sam convertor
Language:Rust
RobertBakaric/SegFilt
SEG filter for amino acid sequences
Language:C++
RobertBakaric/SeqLite
Ultra-fast, simple fast(q/a) key-value stores (with raw data storage support)
Language:Rust
RobertBakaric/SuffixArray
Suffix array computation tool
Language:C++
RobertBakaric/susq
Shortest unique substring point and interval query library
Language:Rust
RobertBakaric/TCGAWorkflow
TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages
Language:R
RobertBakaric/XnuFilt
XNU filter for amino acid sequences
Language:C++2 0
RobertBakaric/YDL
Young Diagram Lattice Calculator
Language:Perl2 0
RobertBakaric/ZFLib
Fast(Q/A) compression library
Language:Rust