RoganGrant
Postdoc in the Chandel Laboaratory at Northwestern University studying the role of mitochondrial dysfunction and neuroinflammation in aging and dementia
Northwestern UniversityChicago, IL
Pinned Repositories
Reczek_2024
Relevant code for "Metformin targets mitochondrial complex I to lower blood glucose levels", Science Advances (2024)
configs
Config files used to define parameters specific to compute environments at different Institutions
2020_Grant
Code base for the Grant, Morales-Nebreda, and Markov et al., “Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia” Nature (2021) paper
2023_Grant_Poor
Public respository for the manuscript: "Prolonged exposure to lung-derived cytokines is associated with inflammatory activation of microglia in patients with COVID-19
utils
Collection of useful scripts, largely for sequence analysis
configs
Config files used to define parameters specific to compute environments at different Institutions
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
teaching_materials
utils
Collection of useful scripts, largely for sequence analysis
tidyseurat
Seurat meets tidyverse. The best of both worlds.
RoganGrant's Repositories
RoganGrant/configs
Config files used to define parameters specific to compute environments at different Institutions
RoganGrant/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
RoganGrant/teaching_materials
RoganGrant/utils
Collection of useful scripts, largely for sequence analysis