Pinned Repositories
bisque
An R toolkit for estimation of cell composition from bulk expression data
BrainDeconBenchmark
This study benchamrked the performance of existing cell deconvolution methods with human brain transcriptome and evaluated the biological applications of deconvoluted data in eQTL mapping and differential expression analysis.
bustools
Tools for working with BUS files
CellSpecificAnalysis
Cell type-specific analysis of gene expression in schizophrenia
CellTypeInferenceMethods
A public list of computational methods for cell type inference from genome-scale DNA methylation data
CortexCellDeconv
csuWGCNA
Combination of signed and unsigned WGCNA
miRNA_brain_regulation
Multiple-omics analysis of miRNA regulations in human brain
swCAM
Sample-specific deconvolution (debCAM2.0)
VICE
A R package for calculating expression variability in single-cell data
RujiaDai's Repositories
RujiaDai/csuWGCNA
Combination of signed and unsigned WGCNA
RujiaDai/BrainDeconBenchmark
This study benchamrked the performance of existing cell deconvolution methods with human brain transcriptome and evaluated the biological applications of deconvoluted data in eQTL mapping and differential expression analysis.
RujiaDai/CellSpecificAnalysis
Cell type-specific analysis of gene expression in schizophrenia
RujiaDai/bisque
An R toolkit for estimation of cell composition from bulk expression data
RujiaDai/bustools
Tools for working with BUS files
RujiaDai/CellTypeInferenceMethods
A public list of computational methods for cell type inference from genome-scale DNA methylation data
RujiaDai/CortexCellDeconv
RujiaDai/miRNA_brain_regulation
Multiple-omics analysis of miRNA regulations in human brain
RujiaDai/swCAM
Sample-specific deconvolution (debCAM2.0)
RujiaDai/VICE
A R package for calculating expression variability in single-cell data
RujiaDai/deconv_benchmark
RujiaDai/EAS-and-EUR-brain-regulatory-pattern-discovory-and-comparson-pipeline
East Asian data production and analysis pipelines
RujiaDai/MGenrich
Brain-cell marker genes enrichment analysis
RujiaDai/miRNA-SNP
Analysis to reveal SNPs modulating miRNA-gene interactions in tumors
RujiaDai/neuron-counting
Automatic neuron counting for DAB staining slides
RujiaDai/UCINIHShortCourse2021