RyloByte

Pinned Repositories

BLOB
Code and data repository for the BLOB manuscript
0 4 00
RefPkgs
Repository for TreeSAPP reference packages
Language:Python1 4 43
reMap
reMap: relabeling metabolic pathway data with groups to improve prediction outcomes
Language:Python1 4 00
SABer
SAG Anchored Binner
Language:Python3 3 82
samsum
A light-weight python package for summarizing sequence coverage from SAM and BAM files
Language:Python5 4 103
MAGSplitter
Standalone script to split a Metapathways metagenome output by MAGs
Language:Python1 2 01
JunkDrawer
I always keep the good stuff here...
Language:HTML00
metapathways2
MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds
Language:Python0 2 00
MetaPathways_Python.3.0
MetaPathways is a meta'omic analysis pipeline for the annotation and analysis for environmental sequence information. MetaPathways is a modular annotation and analysis pipeline that uses a user-friendly graphical user interface and knowledge engine data structure to predict metabolic interaction networks from environmental sequence information. Currently, MetaPathways supports genomic read quality control, open reading frame (ORF) prediction, ORF annotation, and environmental pathway-genomes database (ePGDB) construction compatible with the Pathway Tools browser by SRI.
Language:Python0 0 00
WisePair
Population simulation, re-sampling, and analysis
Language:Python1 2 00

RyloByte's Repositories

RyloByte/WisePair
Population simulation, re-sampling, and analysis
Language:Python1 2 00
RyloByte/JunkDrawer
I always keep the good stuff here...
Language:HTML00
RyloByte/metapathways2
MetaPathways v2.0: A master-worker model for environmental Pathway/Genome Database construction on grids and clouds
Language:Python0 2 00
RyloByte/MetaPathways_Python.3.0
MetaPathways is a meta'omic analysis pipeline for the annotation and analysis for environmental sequence information. MetaPathways is a modular annotation and analysis pipeline that uses a user-friendly graphical user interface and knowledge engine data structure to predict metabolic interaction networks from environmental sequence information. Currently, MetaPathways supports genomic read quality control, open reading frame (ORF) prediction, ORF annotation, and environmental pathway-genomes database (ePGDB) construction compatible with the Pathway Tools browser by SRI.
Language:Python0 0 00