Pinned Repositories
BakingTray
Serial-section automated anatomy extension for ScanImage
HiLo_SIM
Basic implementation of HiLo structured illumination algorithm in MATLAB
linux_cli_intro
Presentation for intro to Linux CLI using the Linux CLI
MATLAB_DAQmx_examples
DAQmx Examples using MATLAB
multiphoton-qc
Measure PSF FWHM along different axes
Python_DAQmx_examples
DAQmx Examples using Python with NI's nidaqmx package
ScanImageTileScan
MATLAB-based ScanImage tile scanner
SimpleMScanner
Simple MATLAB scanning software for demo purposes
SimplePyScanner
Simple Python scanning software for demo purposes
StitchIt
Stitching of large tiled datasets
SWC Advanced Microscopy Facility's Repositories
SWC-Advanced-Microscopy/multiphoton-qc
Measure PSF FWHM along different axes
SWC-Advanced-Microscopy/MATLAB_DAQmx_examples
DAQmx Examples using MATLAB
SWC-Advanced-Microscopy/StitchIt
Stitching of large tiled datasets
SWC-Advanced-Microscopy/BakingTray
Serial-section automated anatomy extension for ScanImage
SWC-Advanced-Microscopy/Python_DAQmx_examples
DAQmx Examples using Python with NI's nidaqmx package
SWC-Advanced-Microscopy/SimplePyScanner
Simple Python scanning software for demo purposes
SWC-Advanced-Microscopy/HiLo_SIM
Basic implementation of HiLo structured illumination algorithm in MATLAB
SWC-Advanced-Microscopy/SimpleMScanner
Simple MATLAB scanning software for demo purposes
SWC-Advanced-Microscopy/linux_cli_intro
Presentation for intro to Linux CLI using the Linux CLI
SWC-Advanced-Microscopy/ScanImageAPI_Examples
ScanImage API Examples
SWC-Advanced-Microscopy/ScanImageTileScan
MATLAB-based ScanImage tile scanner
SWC-Advanced-Microscopy/volView
Simple image stack visualizer for MATLAB
SWC-Advanced-Microscopy/btpytools
Python-based BakingTray and StichIt helper tools
SWC-Advanced-Microscopy/lensdistort
Correct barrel and pincushion distortion
SWC-Advanced-Microscopy/diffuserwavefrontsensor
Implements a diffuser-based wavefront sensor
SWC-Advanced-Microscopy/2p_crosssection_viewer
Webpage with interactive plot of commonly used 2p dye cross-sections
SWC-Advanced-Microscopy/image-analysis-python
Materials for the SWC course on Image Analysis in Python
SWC-Advanced-Microscopy/laser_calculator
Laser safety calculator for 3b lasers
SWC-Advanced-Microscopy/noise-practical
SWC-Advanced-Microscopy/standard_source_to_photons
Repo to develop protocols for converting a standard fluorescent source to photons
SWC-Advanced-Microscopy/swc-advanced-microscopy.github.io
facility webpage
SWC-Advanced-Microscopy/SWC_Optics_Course_Practicals