Sachuriga
Post doc at kavli NTNU. Interested in neuroscience, brain functions, coding and building hardwares.
Kavli Institute for Systems Neuroscience, NTNUTrondheim
Pinned Repositories
grok-1
Grok open release
quattrocolo-nwb4fp
buzcode
Code for internal lab sharing - polishing has started but is by no means complete
CellExplorer
CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.
DataHigh
DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity
DeepSlice
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
DLC2Kinematics
a module for kinematic analysis of deeplabcut outputs
dPCA
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)
ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
keypoint-moseq
Sachuriga's Repositories
Sachuriga/quattrocolo-nwb4fp
Sachuriga/QG_pynapple
PYthon Neural Analysis Package :pineapple:
Sachuriga/manim
A community-maintained Python framework for creating mathematical animations.
Sachuriga/Kilosort4
Fast spike sorting with drift correction for up to a thousand channels
Sachuriga/grok-1
Grok open release
Sachuriga/QuattrocoloLab2nwb-spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
Sachuriga/QuattrocoloLab2nwb-pynwb
A Python API for working with Neurodata stored in the NWB Format
Sachuriga/QuattrocoloLab2nwb-neuroconv
Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
Sachuriga/QuattrocoloLab2nwb-probinterface
Python package to handle probe layout, geometry and wiring to device.
Sachuriga/Quattrocolo-ptsa
PTSA - Python Time Series Analysis
Sachuriga/quality_metrix
Sachuriga/DeepSlice
A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.
Sachuriga/DLC2Kinematics
a module for kinematic analysis of deeplabcut outputs
Sachuriga/keypoint-moseq
Sachuriga/CellExplorer
CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.
Sachuriga/nutil
https://nutil.readthedocs.io/en/latest/
Sachuriga/buzcode
Code for internal lab sharing - polishing has started but is by no means complete
Sachuriga/UnitMatch
Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
Sachuriga/NeuroChaT
Analysis toolset with GUI for Neuroscience
Sachuriga/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
Sachuriga/pycircstat
Toolbox for circular statistics with Python
Sachuriga/quattrocolo-phase-precession
Measures for phase precession
Sachuriga/dPCA
An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)
Sachuriga/DataHigh
DataHigh: A graphical user interface for visualizing and interacting with high-dimensional neural activity