Sage-Bionetworks/synAnnotationUtils

Issues

• add setup.py versioning and scripts

  #53 opened 7 years ago by teslajoy
  1

• Remove bin/sync_to_synapse.py after client 1.7.3 is released.

  #46 opened 7 years ago by kdaily
  1

• expand sampleID lists of a file view and associate each to its annotation schema value

  #28 opened 7 years ago by teslajoy
  3

• shrinkFields Function

  #35 opened 7 years ago by teslajoy
  3

• Delete Rows Function

  #36 opened 7 years ago by teslajoy
  2

• Create an empty entity-view given a list of columns (or json keys)

  #40 opened 7 years ago by teslajoy
  2

• update readme and sphinx

  #51 opened 7 years ago by teslajoy
  0

• automate release process for synAnnotations

  #49 opened 7 years ago by kkdang
  1

• Add to existing or change (revise) the scope of a view (project or file)

  #57 opened 7 years ago by teslajoy
  0

• Create markdown documentation for each command

  #42 opened 7 years ago by sgosline
  5

• Script to create/update file view with json description of annotation schema

  #58 opened 7 years ago by sgosline
  1

• Create project views (given a list of project synIds)

  #41 opened 7 years ago by teslajoy
  1

• add function to create a summary table for annotated files in file view

  #26 opened 8 years ago by teslajoy
  1

• parallelize annotation update

  #14 opened 7 years ago by kdaily
  1

• don't rely on file names for matching metadata

  #12 opened 7 years ago by kdaily
  1

• Create an empty entity-view given: scope, name, and a list of column names (key in manifest)

  #34 opened 7 years ago by teslajoy
  2

• add arg parser in bin directory

  #52 opened 7 years ago by teslajoy
  0

• Create integration and unit tests python scripts

  #33 opened 7 years ago by teslajoy
  1

• make it a package

  #1 opened 7 years ago by kkdang
  4

• move unit tests of scripts from synapseAnnotations to this repo

  #56 opened 7 years ago by teslajoy
  1

• add provenance to annotations modules table in Synapse

  #48 opened 7 years ago by kkdang
  1

• Would like to be able to accommodate annotating all contents of a folder

  #31 opened 7 years ago by sgosline
  1

• annotation queries against file views

  #20 opened 7 years ago by kkdang
  2

• all annotation changes to use CSV uploads.

  #19 opened 7 years ago by kkdang
  3

• entity-view update synapse and row indices error

  #39 opened 7 years ago by teslajoy
  2

• Merge repo into synapseAnnotations

  #29 opened 7 years ago by jaeddy
  4

• add facility to search existing dictionaries

  #30 opened 7 years ago by kkdang
  2

• add ability to write out a blank manifest, taking in one or more schemas.

  #16 opened 7 years ago by kkdang
  3

• Annotate from Synapse Table

  #4 opened 8 years ago by sgosline
  1

• do not require forceVersion false for syn store

  #13 opened 8 years ago by kdaily
  0

• Reduce REST calls in annotation auditing

  #2 opened 8 years ago by kkdang
  0

• Iterator for audit function

  #3 opened 8 years ago by kkdang
  0