Details
Solved includes:
File Link
From Chapter 1:Problem No | Problem Name | Problem Link |
---|---|---|
BA1A | Compute the Number of Times a Pattern Appears in a Text | problem Link |
BA1B | Find the Most Frequent Words in a String | problem Link |
BA1C | Find the Reverse Complement of a String | problem Link |
BA1D | Find All Occurrences of a Pattern in a String | problem Link |
BA1E | Find Patterns Forming Clumps in a String | problem Link |
BA1F | Find a Position in a Genome Minimizing the Skew | problem Link |
BA1G | Compute the Hamming Distance Between Two Strings | problem Link |
BA1H | Find All Approximate Occurrences of a Pattern in a String | problem Link |
BA1I | Find the Most Frequent Words with Mismatches in a String | problem Link |
BA1J | Find Frequent Words with Mismatches and Reverse Complements | problem Link |
BA1K | Generate the Frequency Array of a String | problem Link |
BA1L | Implement PatternToNumber | problem Link |
BA1M | Implement NumberToPattern | problem Link |
BA1N | Generate the d-Neighborhood of a String | problem Link |
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From Chapter 2:Problem No | Problem Name | Problem Link |
---|---|---|
BA2A | Implement MotifEnumeration | problem Link |
BA2B | Find a Median String | problem Link |
BA2C | Find a Profile-most Probable k-mer in a String | problem Link |
BA2D | Implement GreedyMotifSearch | problem Link |
BA2E | Implement GreedyMotifSearch with Pseudocounts | problem Link |
BA2F | Implement RandomizedMotifSearch | problem Link |
BA2H | Implement DistanceBetweenPatternAndStrings | problem Link |
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From Chapter 3:Problem No | Problem Name | Problem Link |
---|---|---|
BA3A | Generate the k-mer Composition of a String | problem Link |
BA3B | Reconstruct a String from its Genome Path | problem Link |
BA3C | Construct the Overlap Graph of a Collection of k-mers | problem Link |
BA3D | Construct the De Bruijn Graph of a String | problem Link |
BA3E | Construct the De Bruijn Graph of a Collection of k-mers | problem Link |
BA3F | Find an Eulerian Cycle in a Graph | problem Link |
BA3G | Find an Eulerian Path in a Graph | problem Link |
BA3H | Reconstruct a String from its k-mer Composition | problem Link |
BA3I | Find a k-Universal Circular String | problem Link |
BA3L | Construct a String Spelled by a Gapped Genome Path | problem Link |
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From Chapter 4:Problem No | Problem Name | Problem Link |
---|---|---|
BA4A | Translate an RNA String into an Amino Acid String | problem Link |
BA4B | Find Substrings of a Genome Encoding a Given Amino Acid String | problem Link |
BA4C | Generate the Theoretical Spectrum of a Cyclic Peptide | problem Link |
BA4H | Generate the Convolution of a Spectrum | problem Link |
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From Chapter 9:Problem No | Problem Name | Problem Link |
---|---|---|
BA9G | Construct the Suffix Array of a String | problem Link |
BA9I | Construct the Burrows-Wheeler Transform of a String | problem Link |
BA9J | Reconstruct a String from its Burrows-Wheeler Transform | problem Link |
BA9K | Generate the Last-to-First Mapping of a String | problem Link |