SalvadorGJ

SalvadorGJ's Stars

• gsneha26/SegAlign

  A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043

  Language:C++6315

• lastz/lastz

  Program for aligning DNA sequences, a pairwise aligner.

  Language:C19134

• salesforce/progen

  Official release of the ProGen models

  Language:Python584111

• jerry955071/NanoPreP

  A fully-equipped, fast, memory-efficient pre-processor for ONT transcriptomic data

  Language:Python22

• comprna/RATTLE

  Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing

  Language:C++5610

• aljpetri/isONform

  De novo construction of isoforms from long-read data

  Language:Python141

• gpertea/stringtie

  Transcript assembly and quantification for RNA-Seq

  Language:C++35675

• TransDecoder/TransDecoder

  TransDecoder source

  Language:Perl25757

• TrinityCTAT/CTAT-LR-fusion

  fusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector

  Language:Perl8

• nextflow-io/nextflow

  A DSL for data-driven computational pipelines

  Language:Groovy2.6k605

• lh3/jstreeview

  Interactive phylogenetic tree viewer/editor

  Language:JavaScript463

• bcgsc/peekseq

  De novo protein-coding potential calculator using a k-mer approach

  Language:Perl4

• nanoporetech/dorado

  Oxford Nanopore's Basecaller

  Language:C++44354

• bcgsc/RNA-Bloom

  :hibiscus: reference-free transcriptome assembly for short and long reads

  Language:Java857