SamStudio8/majora2

Issues

• Migrate non-biosample endpoints to partial-friendly endpoints

  #50 opened 3 years ago by SamStudio8
  0

• General tidying tracking issue

  #15 opened 3 years ago by SamStudio8
  0

• COGUK General Tracking Issue

  #13 opened 3 years ago by SamStudio8
  24

• validate sequencing start_time and end_time

  #70 opened 3 years ago by SamStudio8
  0

• Mechanism to renew MDV access

  #38 opened 3 years ago by SamStudio8
  0

• all dice_name should be 96 chars

  #62 opened 3 years ago by SamStudio8
  0

• [future] Majora 3.0

  #44 opened 4 years ago by SamStudio8
  0

• Add library HTTP 500 on malformed biosamples key

  #59 opened 3 years ago by SamStudio8
  0

• [r&d] info endpoint

  #55 opened 4 years ago by SamStudio8
  0

• Expose a method to run QC without sending API requests

  #54 opened 4 years ago by SamStudio8
  0

• Add a new test platform and kit to the list of CT Validators

  #48 opened 4 years ago by MattBashton
  1

• Remove `nullable=True` from `CharField` where not required

  #51 opened 4 years ago by SamStudio8
  0

• Uploader PATCH support

  #32 opened 4 years ago by SamStudio8
  2

• Tatl GenericForeignKey should be replaced with something less bad

  #49 opened 4 years ago by SamStudio8
  0

• Unify task_get_pag_by_qc_faster and task_get_pag_by_qc

  #42 opened 4 years ago by SamStudio8
  7

• Add another PCR platform and test kit to the API

  #46 opened 4 years ago by MattBashton
  5

• Cache PAG serialization

  #20 opened 4 years ago by SamStudio8
  5

• Integrate basic bioinformatics pipeline metadata to the uploader stream

  #45 opened 4 years ago by SamStudio8
  12

• Add a box with the callback URL to OAuth response page

  #40 opened 4 years ago by m-bull
  0

• Make better use of pre and post_save signals to catch things for Tatl

  #19 opened 4 years ago by SamStudio8
  1

• Long-standing messy stuff tracker

  #22 opened 4 years ago by SamStudio8
  0

• Mechanism to version sequences (PAGs)

  #30 opened 4 years ago by SamStudio8
  0

• Data view caching

  #35 opened 4 years ago by SamStudio8
  1

• resty tracking issue

  #26 opened 4 years ago by SamStudio8
  2

• Documentation

  #23 opened 4 years ago by SamStudio8
  4

• Break apart the monolith

  #16 opened 4 years ago by SamStudio8
  2

• API should respond with empty string, not "None" when a value is `None`

  #17 opened 4 years ago by SamStudio8
  1

• Mechanism to update GISAID and ENA

  #31 opened 4 years ago by SamStudio8
  1

• BSA and DRA should both have a name and path (path should probably be an AAA)

  #33 opened 4 years ago by SamStudio8
  1

• Endpoint for fetching files newly added and suppressed after particular date (for ELAN3)

  #43 opened 4 years ago by SamStudio8
  1

• Metadata completeness metrics/dashboard, surveillance information

  #28 opened 4 years ago by SamStudio8
  2

• Improve serializer performance

  #34 opened 4 years ago by SamStudio8
  2

• Mitigate problem between sequencing run and PAG API endpoints

  #27 opened 4 years ago by SamStudio8
  1

• Artifact view displays Participant: "None" when no age recorded

  #41 opened 4 years ago by m-bull
  1

• Expose API for dashboard information

  #5 opened 4 years ago by SamStudio8
  2

• api for establishing run -> library ->biosample linkage (no metadata reveal)

  #39 opened 4 years ago by dkj
  0

• Slow performance rendering artifacts recently

  #25 opened 4 years ago by SamStudio8
  2

• Switch to lazy searching of DigitalArtifactGroups to improve performance in artifact.file.add API

  #36 opened 4 years ago by SamStudio8
  2

• Public data endpoints

  #29 opened 4 years ago by SamStudio8
  2

• Return better API errors when objects exist

  #9 opened 4 years ago by SamStudio8
  1

• Should probably incorporate Django-REST

  #18 opened 4 years ago by SamStudio8
  1

• Remove need to bind ocarina PAG calls to the metadata table

  #21 opened 4 years ago by SamStudio8
  2

• Render sample list for logged in user (not just on profile) and link from dashboard

  #6 opened 4 years ago by SamStudio8
  0

• [low] Slow loading on very large dirs

  #14 opened 4 years ago by SamStudio8
  0

• Retrieve genome sequence records over the API

  #24 opened 4 years ago by daveuu
  0

• try and handle NA on forms

  #12 opened 5 years ago by SamStudio8
  0

• catch whitespace on forms

  #11 opened 5 years ago by SamStudio8
  0

• Where to generate the GISAID identifer

  #10 opened 5 years ago by SamStudio8
  2

• Make run_group optional for single library single run users

  #7 opened 5 years ago by SamStudio8
  0

• Remove override_heron check

  #8 opened 5 years ago by SamStudio8
  0