Samuel-gwb

alphafold3

AlphaFold 3 inference pipeline.

atom3d

ATOM3D: tasks on molecules in three dimensions

CLEAN

CLEAN: a contrastive learning model for high-quality functional prediction of proteins

dl_binder_design

IgFold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

Machine-learning-for-proteins

Listing of papers about machine learning for proteins.

NeuralPLexer

NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

ProteinMPNN

Code for the ProteinMPNN paper

RFdiffusion

Code for running RFdiffusion

Samuel-gwb/atom3d

ATOM3D: tasks on molecules in three dimensions

Samuel-gwb/RFdiffusion

Code for running RFdiffusion

Samuel-gwb/CLEAN

CLEAN: a contrastive learning model for high-quality functional prediction of proteins

Samuel-gwb/dl_binder_design

Samuel-gwb/IgFold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

Samuel-gwb/Machine-learning-for-proteins

Listing of papers about machine learning for proteins.

Samuel-gwb/NeuralPLexer

NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

Samuel-gwb/openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

Samuel-gwb/ProteinMPNN

Code for the ProteinMPNN paper